HTGTLBGXG_n02_S1_R1_C07-FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTGTLBGXG_n02_S1_R1_C07-FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	394789
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTGGGGTGAGTCACAGTTCTCAAAACATAGAGTAAATCCTGTCACTT	653	0.1654048111776164	No Hit
GTGCAGCAGCTACTGAAAACAATATGGCAGTTCATCAAAAAATTAAAAAT	501	0.12690323185296448	No Hit
GGATACACCAGCCTGGGAGCGGCGAGCAGAGCTGCGAGTGGTGGGCCGGT	493	0.12487683294114071	No Hit
CTACAGGTATGGCCACAGTTGACAGAGTATTGGGGTGAGTCACAGTTCTC	460	0.1165179374298676	No Hit
TGTAGAAGCTGTTCCTTCCTGGAGGGACCCCACTGGATACACCAGCCTGG	453	0.11474483838202179	No Hit
TTACCATACAGATGACTGTGCTTTTTAAAGTAACAGACTCTGAACTCCAA	450	0.11398493879008786	No Hit
GAATAAAGGAAATAGCCCTTTTTTATCAAGTGGATCTGAAAAGCTCTTGG	447	0.11322503919815395	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGAAA	150	0.0	87.08991	1
CTTATTC	50	2.0098218E-4	57.993717	2
GTCTATA	55	3.218331E-4	52.721558	2
TATAGAC	55	3.218331E-4	52.721558	2
GCAGATC	100	4.7162757E-8	50.71879	9
GTTCATA	45	0.009595601	48.38328	1
TCCGTGA	45	0.009638972	48.32809	2
TTAAGAC	45	0.009653461	48.309723	3
GGATAGC	90	1.3271365E-6	48.303604	5
GTATAAC	45	0.009658295	48.303604	9
CTTATAA	65	7.3350774E-4	44.61055	145
TATAGTG	120	1.9710569E-7	42.287083	2
TATACTA	165	1.369699E-9	39.52113	5
CTCGCCC	75	0.0014830863	38.662476	145
TAATGGT	75	0.0014867856	38.642887	4
GGTCTAT	100	1.3815E-4	36.287468	1
TAGGAGC	80	0.0020425494	36.223114	6
CGAAAGC	365	0.0	35.735962	3
ACCGTCC	85	0.0027499695	34.092342	8
GTTATAT	110	2.4187728E-4	32.988605	1