FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R1_A09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R1_A09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCAAATAGGTGCTTCAATAGTGCATTCGGGTCCACAGATTCTACAATT10.9708737864077669No Hit
GGCGAAGAGACAATAGCAGAAAAATTTGCGATTACCGGAACTATCCGGAA10.9708737864077669No Hit
GCATTGTTTACAGAATCATGCTCTTTATGACTGGCAAAGGGATTCAGGGG10.9708737864077669No Hit
AGTCGAAACCCAGGAAACGCTGAGATTGAAGACCTCATTTTCCTGGCACG10.9708737864077669No Hit
GCAGATACTGGGCCATAAGGACCAGGAGTGGAGGAAATACCACTCAACAA10.9708737864077669No Hit
ATCAATCTCTTTATGACTGACAAAGGTATTCAGGGGATTACAAAGTCTTC10.9708737864077669No Hit
TCCACTCCACTGGGTGACTCTCCGATTGGGCATGTTGAAGATTTGTTTTC10.9708737864077669No Hit
GGTCAACGTATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCA10.9708737864077669No Hit
GTATAAGTTTGGTCCTCCATCTGATACTAATAGCCCTACCTTTGATTGGG10.9708737864077669No Hit
GCATTGGCCAACACCATAGAAGTCTTTAGATCGAATGGCCTAACAGCTAA10.9708737864077669No Hit
ATCCTCCAGACCACTCGCGCCGTGCTGGAGTATTCATCTCATCCCATTTT10.9708737864077669No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA10.9708737864077669No Hit
ACCCTGGCATCAATCCGGGCCCTAGACACCATGGCCTCCACCATGCTAGA10.9708737864077669No Hit
CGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCATGATCCGTCCAG10.9708737864077669No Hit
ACTTGAGGGGTTTTCGGCTGAATCTAGAAAATTGCTTCTCATTGTTCAGG10.9708737864077669No Hit
CTTTTGGTCGGTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGGTTTGG10.9708737864077669No Hit
TAAAAGAACTGAGATATCTAATGTCGCAGTCCCGCACAAGCGAGATACTC10.9708737864077669No Hit
AGACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATTGGGCA10.9708737864077669No Hit
GGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACACCATGGACAC10.9708737864077669No Hit
CAATAGTACGTTCCCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATAC10.9708737864077669No Hit
TCTCTAACCCTTAAAAATCGGTCAATACTCCCTACCACTCTCTCCGTGCT10.9708737864077669No Hit
ATCAATAATTGTAGAATCTGTTGACCCGAATTCACTATTGAAGGCCAATA10.9708737864077669No Hit
AGTAAGTAAGTATAGAATAATAGTACACAGACAGCAAACGACGCACAACC10.9708737864077669No Hit
ACACTGTAGAGACCCATTAAAGCACATCAAGAAACTGATTGCCCCCAGGT10.9708737864077669No Hit
TCATAAGTACCATTTTTTACACTTTCAATGCACGTGTTATCGCATTTGTG10.9708737864077669No Hit
CATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTC10.9708737864077669No Hit
CCCTTTCCCTAGTCTTGCCATTTTGTTTGAGAACATTATAGGTGCCATGC10.9708737864077669No Hit
GGCCATGGTGTCTAGGGCCCGGATTGATGCCAGGGTCGACTTCGAGTCTG10.9708737864077669No Hit
CTCCTCGATTGCTTCATATAGCCCCCCAAGATCGAAGGTTCCAGGTTCCA10.9708737864077669No Hit
CCTCCACTCCCCTGGGTGACTCTCCTATTGGCCATGTTTCCGATTTGTTT10.9708737864077669No Hit
TACCCAATTAGGAATGAACAAGGACAAACCCTCTGGAGCAAACCAAACGA10.9708737864077669No Hit
ATTGAAGGAAGAGCCCGAATCATGGCCTGGACAGTGGTGAACAGTATTGA10.9708737864077669No Hit
CTAAGACCACTGTTGACAATATGGCCATAATCAAAAAGTACACATCAGGA10.9708737864077669No Hit
ATTCGCCTGCCTTTTTGAATTCGTTTTGGGCCCAGCTGGCTCGAGCGCTG10.9708737864077669No Hit
ATATCTCTTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAG10.9708737864077669No Hit
AATCATAGCCAAATAAACCATGGCCACAACCATTAAAGAAATTCAAACCG10.9708737864077669No Hit
CGCCCGCAATATCCTGCCCACTCATTTATTCCTACGAGATCTTGCTTTAT10.9708737864077669No Hit
GAAGAAAAGATATCAGCTCGCGAACGTCGCCGTCGGGCGATCGCGTGATA10.9708737864077669No Hit
GGAGTGGACAGATTCTACAGGACCTGCAAGTTAGTGGGAATCAACATGAG10.9708737864077669No Hit
ATTGAAGGAAGAGACCGAATCATGGCCTGGACAGTGGTGAACAGTATATG10.9708737864077669No Hit
ACCTCCACACACTGAAAATAAGATTAGATGAAGGGTATGATCTATTCACA10.9708737864077669No Hit
TAGTAGCATTGCACCAACTACTTCAGTCCATGTGTGAGGAAGGACTTGAA10.9708737864077669No Hit
ATTTATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA10.9708737864077669No Hit
CATTAGCCTTCTCTCATTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT10.9708737864077669No Hit
GCGCAAGCTTGCCGACAAAAGTCTCACCAAGAACTTCCCCAGCCTTGAAA10.9708737864077669No Hit
TTTTTAAACAATTCGAAACTAATTCATGCCAAACCCAATTCTTTTGGTCG10.9708737864077669No Hit
CCTGGGTGGGAGGAGCAGATACTGGGCCAGTAGGACCGGGAGTGGAGGGA10.9708737864077669No Hit
ATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGCTTCTACTCTTGC10.9708737864077669No Hit
CACAAACACCAATGAGCACCATATCGCCACGAAGGAAAGAGAAGAACCAC10.9708737864077669No Hit
TACTTCAGGTCAATGCTTGCTAGCATTTCTGCTGGTATTTGTGTTCGAAT10.9708737864077669No Hit
ATTCAGAAGCCCTGCAGTGGGACACTTCTGCTGTAAAATAGTTCCTCCTC10.9708737864077669No Hit
GACCAAAGATGCAGAGAGAGGCAAGGTAAAAAGCAGGGCTATCGCACCAC10.9708737864077669No Hit
ACATAGGCTCTAAAGTTTTCAAGGCTGGGGAAGTTCGGTGGGAGACTTTG10.9708737864077669No Hit
ACCCCTGTTGTGTTACATATACTGTTCACCACTGTCCAGGACATGATTCG10.9708737864077669No Hit
ACCTGCAAGTTAGTGGGAATCAACATGAGCAAAAAGAAGTCCTATATAAA10.9708737864077669No Hit
CAATATGAACAGAATAAAAGAACTCAGAGATCTAATCTCTCAGTCCCGAA10.9708737864077669No Hit
TGTCATATCCGAAATATATTTGCAGACAATGGATTGGGTGATGAACCATT10.9708737864077669No Hit
GTCCCTTTTTCGTTTCATTACCAACACTACGACCCCTATCCCAATTAGCA10.9708737864077669No Hit
CCATACAGCCATGGAACAGGAACAGGATACACCATGGACACAGTAAACAG10.9708737864077669No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.9708737864077669No Hit
AACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAG10.9708737864077669No Hit
CCCTTACACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA10.9708737864077669No Hit
GCGATAAAAAAAGCTTGTGAATTCAAATGTCCCTGTGTTATTTATATAGG10.9708737864077669No Hit
CACAAATGGGAAAAATACTGTGTTCTTGAAATAGGAGACATGCTCTTGAG10.9708737864077669No Hit
GTTCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTCTTCATTCCTCTCT10.9708737864077669No Hit
CCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATACTCACTACCACTCT10.9708737864077669No Hit
AAAGCAGGCAAACCATTTGAATGGATGTCAATCCGACTCTACTTTTCCTA10.9708737864077669No Hit
GTATACACCAGGTCGGTTTGAAACAATTATCAACTAATGGATGGCCATCA10.9708737864077669No Hit
GGATACACCATGGACACAGTAAACAGAACACACCAATACTCAGAAAAGGG10.9708737864077669No Hit
GTGCTTTGGACATTTGACACTGTCCAAATAATAAAACTTCTCCCCTTAGC10.9708737864077669No Hit
CATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAATAACTAATTGG10.9708737864077669No Hit
GACTTCAGGAATGTGAATATTCCGGATATTGAATAAGTTTGGTCCTCCAT10.9708737864077669No Hit
GCTTAATGCATCTTGGTTCAACTCCTTCCTCACACATGCACACAAGTAGT10.9708737864077669No Hit
GTAGCAGCTCTCCCCTACTGGATGTATTCCCTCATCGGTTGGTGCATGCA10.9708737864077669No Hit
GTAATTATTTTCTCAATATTATTCTTTTTAGATTCATTGAAGTACTTCCG10.9708737864077669No Hit
GAATGAAGTGGATGATGGCAATGAGATACACAATTACACCAGACAAGAGC10.9708737864077669No Hit
TAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAA10.9708737864077669No Hit
AACCTGGAACCTGGAACCTTCGAGCTTGGGGGGCTATATGAAGCAATCGA10.9708737864077669No Hit
TGATGTGGTAGATCAATGGCCCTGAGTCAGAGCTAGTCAACACTTATCAA10.9708737864077669No Hit
AATCAGTTAAGTTGGGGCATCAGCAAAGGGTAGAAGAGTTATTATATGTA10.9708737864077669No Hit
ATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACT10.9708737864077669No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG10.9708737864077669No Hit
GGACAAGGGTTGCTTATGAAAGAATGTGCAATATCCTCAAAGGAAAATTT10.9708737864077669No Hit
GCTAGCACCTGATTCCAAGACATGAGGTAATTGGGATTTATTCATTTCTC10.9708737864077669No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCGTTCCTGATGTGTACTTTT10.9708737864077669No Hit
GGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGA10.9708737864077669No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAA10.9708737864077669No Hit
TTCCTCCACTCCCCTGGGTGACTCTCCGATTGGCCATGTTTCCGATTTGT10.9708737864077669No Hit
ATTCAATATGGAGAGAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT10.9708737864077669No Hit
GGTGGGGGGGGGGGGGGGCCTGTTGGGGGGGGGCGGGGTGTGGAGGGCGG10.9708737864077669No Hit
CTCTAATTGATGGCCATCCGAATACTTTTGGTCGCTGTCTGGCAGTCAGT10.9708737864077669No Hit
CCATGATAGAAATTCCATCAGGTCTCCTATATGAACTGCTTGGGAAATAT10.9708737864077669No Hit
CCCAGTCTATACTTTTGAAAGAGTTCTAACATCATCTTTTTTTTTTCTCG10.9708737864077669No Hit
GCAGCCCCGAGTCACGAGGGGGAGGGAATACCAGTATATGATGCAATCAA10.9708737864077669No Hit
ATCTGGGCCGTTGCAGGTCCAAGGTCATTGTTTATCATGTTGTTGTTTAT10.9708737864077669No Hit
GAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCA10.9708737864077669No Hit
CTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTAGTGTCTGTTCC10.9708737864077669No Hit
GCCTTTATGAGTACTGCTTGGCAAGATAGATGGAATTCGAAGCGGAAACA10.9708737864077669No Hit
CTAGAAACATAGTAAGATGAGAAGCAGTGTCAGCAGCCCCATTAGCATCT10.9708737864077669No Hit
CCTCCAAACACTGAAAATAAGAGTACATGAAGGGTATGAAGAATTCACAA10.9708737864077669No Hit
GTTCACCACTGTCCAGGCCATGATTCGGTCTCTTCCTTCAATTATCTCAA10.9708737864077669No Hit
ATCGCAAAACCTGGGATGCAGATTAGAGGTTTCGTATACTTTGTTGAAAC10.9708737864077669No Hit
AGTAGAAGCAAGGGATTTTTTCTGCCAGGACAAGTTATCTTCATTAATAT10.9708737864077669No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers