FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R2_F04_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R2_F04_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTATGGAT21.9047619047619049No Hit
AGATCGAAGGTTCCAGGTTCCAGGTTGTCCCTAAGTGCCTGAACAATGAG21.9047619047619049No Hit
GGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATG10.9523809523809524No Hit
GCTGATGGATGCTCTGAAATTAAGTATTGAAGACCCGAGTCACGAGGGGG10.9523809523809524No Hit
GTGGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC10.9523809523809524No Hit
AGGAAAGCCATAGCCTCTAGAACACAGTCTGTTTGTGCATACTCACTTGG10.9523809523809524No Hit
GAAATAAATACCTAGAAGAGCATCCCAGTGCTGGGAAGGACCCTAAGAAA10.9523809523809524No Hit
GTTTTATTATTTGGACAGTGTCAAATGTCCCAAGCACATCCCGCATTTGC10.9523809523809524No Hit
CTTTGGGTCTTATTGCTATTTCCGGTTTGAACTTCTTGCTGTATCTTGAT10.9523809523809524No Hit
GGTAGAGAAGCCTAAATTTCTTCCTGATTTGTATGATTACAAAGAGAACC10.9523809523809524No Hit
GTCAGTAAGTATGCTAGAGTCCCGGTTTGGTTTCATTTCCCACCCGACGG10.9523809523809524No Hit
GTGTAGTTGCAACGGCATCATATTCCATGCTTTTGGCTGGACCATGGGCT10.9523809523809524No Hit
GATGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAA10.9523809523809524No Hit
TAGGAACATGGGCCTCGACACTTGGCCTATCGCAGTCCTCAAGAGCATGT10.9523809523809524No Hit
ATATGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATTTGTA10.9523809523809524No Hit
GATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCCTCGATATCGA10.9523809523809524No Hit
TTTTTAAACAATTCGACACTAATTGCTGGCCATCCGAAGTCTTTTGGGCG10.9523809523809524No Hit
GATTAGAGGTTTCGTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCG10.9523809523809524No Hit
TCATATAGCCCCCCAAGATCGAAGGTTCCAGGTTCCAGGTTGTCCCTAAG10.9523809523809524No Hit
GGGCTGCTGACACTGCGGCGCTGGGTGCGATGGGGCGAGCGGCGGTACTC10.9523809523809524No Hit
GTCTTGGGGAATATCTCAAACCTTTCAAATGATGACACTGAGCTCAATTG10.9523809523809524No Hit
GAATTCCTTGGTCATGTCTTTCTCTTTGACAGAAGCCTCGGCCTCAATCA10.9523809523809524No Hit
TCTAATAAGAGCACTGACATTAAATACGATGACCAAAGATGCAGAGAGAG10.9523809523809524No Hit
ATTGATCTCCCACATCATTGATGACGAATAAGTTATTGTCAACTTCTCAG10.9523809523809524No Hit
ACTTAGTGTTGTCCCCAGTGATTGTGAAAGAAATCTCTGTGTCTTGTGAA10.9523809523809524No Hit
GCAATAGGGTTGAGGATTAGCTCATCTTTCAGTTTTGGTGGGTTCACTTT10.9523809523809524No Hit
CTGCAGGGCTACTGAATACATAATGAAGGGAGTGTACATAAATACGGCCT10.9523809523809524No Hit
TGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGC10.9523809523809524No Hit
GTTGTCCCCAGTGATTGTGAAAGAAATCTCTGTGTCTTGTGAATTAGTCA10.9523809523809524No Hit
CCATTAGCCTGCTCTACTTTTGCAAGAGTGCTAAGTTCATTGATTCTTAA10.9523809523809524No Hit
CCATTGTGAATTCTTCATACACTTCATGTACTCTTATTTTCAGTGTTTGG10.9523809523809524No Hit
GTAGAAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCT10.9523809523809524No Hit
GCGGAAAAGGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAA10.9523809523809524No Hit
ATATAAAACTTATTTCGAAAAGGTCGAAAGGTTGAAACATGGTACCTTCG10.9523809523809524No Hit
TTGGATGAGTAAGGATCGTGGACATAGTTAGCAAGAATACAAGTGAGCAA10.9523809523809524No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCTCTTGTCTTC10.9523809523809524No Hit
GTTCATTGATGCTTAATGCTGGGCCTCTTGTCTTCTTTGCCCAAAATGAG10.9523809523809524No Hit
CAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGTCA10.9523809523809524No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA10.9523809523809524No Hit
ACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTTGAAACAT10.9523809523809524No Hit
ATGGTGGACATCCTTAGACAGAATCCAACTGAGGAACAAGCCGTAGACAT10.9523809523809524No Hit
AGGCAGCGCCTCATTTCCATGCCCCATTTCATCTTGATCTTGGAGGTTCC10.9523809523809524No Hit
AATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA10.9523809523809524No Hit
ATCATTAATCAGGCACTCCTCGATTGCTTCATATATCACTCCAAGATCGA10.9523809523809524No Hit
GTCTCCGAAGAAATAAGACCCTTCATTACTCATGTCAAAGGAAGGCACGA10.9523809523809524No Hit
TTATATAGGACTTCTTTTTGCTCATGTTGATTCCCACTAACTTGCAGGTC10.9523809523809524No Hit
CATTAAATACGATGACCAAAGATGCAGAGAGAGGCAAGTTAAAAAGAAGG10.9523809523809524No Hit
AGGAAATTCATACCCAAAGCTCAGCAAATCCTACATTAATGATAAAGGGA10.9523809523809524No Hit
GTTATCTCTATTTCCTCTTTGTTCATTGATTCCATTACATCCTTTAAGAA10.9523809523809524No Hit
GTCAATATTCACTACCACTCTCTCCGTGCTGGAGTATTCATCTACTCCCA10.9523809523809524No Hit
GAAATAAGACCCTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCG10.9523809523809524No Hit
CATTATAAAAGGAAGGTCTCATTTGAGAAATGATACTGATGTGGTGAACT10.9523809523809524No Hit
CGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACA10.9523809523809524No Hit
CTAATAGATGGCACAGCATCACTGAGTCCTGGGATGATGATGGGCATGTT10.9523809523809524No Hit
GGATGTTTCTGAACCACTCGGGTTGATTTCTGGTGATATATGTAATCATC10.9523809523809524No Hit
AAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTTTGCCG10.9523809523809524No Hit
GGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGTCAAT10.9523809523809524No Hit
ATGAAAAGAAGGCCAAACTGGCAAATGTTGTGAGAAAGATGATGACTAAT10.9523809523809524No Hit
CTCTATTTCCTCTTTGTTCATTGATTCCATTACATCCTTTAAGAAATCTA10.9523809523809524No Hit
GCAGAAGTGTCCCACTGCAGGGCTACTGAATACATAATGAAGGGAGTGTA10.9523809523809524No Hit
GAACACAACCATACTCAGAAAAGGGAAAGTACGAGGACGCTTTCTATTCT10.9523809523809524No Hit
ATCAGGAACTGGGAAATTGTGAAAATTCAATGGTCACAAGATCCCACAAT10.9523809523809524No Hit
CAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTTTGCCGTCT10.9523809523809524No Hit
AGTGCTGACCAACAAAGTCTCTATCAGAATGCAGATGCATATGTTTTTGT10.9523809523809524No Hit
GCTGAAACGAGAAAGCTCTTATCTCTTGTTCTACTTCAAGCAGTAGTTGT10.9523809523809524No Hit
CCCATAATGTTCTCAAACAAAATGGCAAGACTAGGGAAAGGGTACATGTT10.9523809523809524No Hit
GGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGG10.9523809523809524No Hit
GCCTTGCTCAATGCATCCTGTGCAGCCATGGATGACTTTCAGCTGATCCC10.9523809523809524No Hit
GTAATGACCGATGGACCAAGTAATGGACAGGCCTCATACAAGATCTTCAG10.9523809523809524No Hit
GTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAACAGATC10.9523809523809524No Hit
GGATACACCATGGACACAGTAAACAGAACACACCAATACTCAGAAAAGGG10.9523809523809524No Hit
GTGTTGCACTTAACCCAAGGGACGTGCTGGGAGCAGATGTACACTCCAGG10.9523809523809524No Hit
CTTCTAATAGATGGCACAGCATCACTGAGTCCTGGGATGATGATGGGCAT10.9523809523809524No Hit
GTAGTGAGTATTGACCGATTTTTAAGGGTTAGAGATCAAAGAGGGAACGT10.9523809523809524No Hit
CACCCCAGCTCAACCCGATTGATGGACCACTACCTGAGGATAATGAACCA10.9523809523809524No Hit
CTATGCGCAAGCTTGCCGACCAAAGTCTCCCACCGAACTTCCCCAGCCTT10.9523809523809524No Hit
AGAATAAACCAAGAATAAAGGTTTATTTTCGTTAGAAGGAACCTACTATT10.9523809523809524No Hit
CTGCCTCCCAGGTGTTGCGATAGCCCTTCTTTTTAACTTGCCGCTCTCTG10.9523809523809524No Hit
GATCCGTCCAGACTCGACGTCGACCCTGGCCTCACTCCGGGCCCGAGCCA10.9523809523809524No Hit
ATGCGCAAGCTTGCCGACCACAGTCTCCCACCGAACTTCCCCAGCCTTGA10.9523809523809524No Hit
GTCATAAAGAGATTGATTCTGTAAACAATGCTGTGGTAATGCCAGCCCAT10.9523809523809524No Hit
TTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG10.9523809523809524No Hit
GTACTATTGTCTCCCGAAGAAGTCAGTGAAACGCAAGGAACTGAGAAGTT10.9523809523809524No Hit
TTTGCTTATCATTGGGATCAGCTGAAAGTCATCCATGGCTGCACAGGATG10.9523809523809524No Hit
ATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCT10.9523809523809524No Hit
GGCTATCGCAACACCTGGGATGCAGATTAGAGGTTTCGTATACTTTGTTG10.9523809523809524No Hit
GGCAAACAATATGGGGAAGATCCCAAAATCGAAACTAACAAGTTTCCTCC10.9523809523809524No Hit
CACTACCACTCTCTCCGTGCTGGAGTATTCATCTACTCCCATTTTGCTGA10.9523809523809524No Hit
GTGTTGGCCAATGCAGTTGCTGCCGGTTGATTTCTGTTTAATGTCCAATC10.9523809523809524No Hit
CATTAAATACGATGACAAAAGATGCAGAGAGAGGCAAGTTAAAAAGAAGG10.9523809523809524No Hit
CATTTGGAAGTTTGTTTCATGTATTCGGATTTCCATTTCATCGACGAACG10.9523809523809524No Hit
GAAGAAAACTATAGGCTTCACGCCACTTCCTGCAGCCAGGCGTTTGATGT10.9523809523809524No Hit
TATAACTTCTGTTCGCATGTCGGATGTCCGTCGTTCATTGTTAACGCTGA10.9523809523809524No Hit
GCACGGAGATGTCGCTGAGAGGGATAAGAGTCAGCAAAATGGGAGTAGAT10.9523809523809524No Hit
TCTTTGCCATCAGCGGTCAAAGTTCCTGCTGATGGATGCTCTGAAATTAA10.9523809523809524No Hit
CAAATGTTGTGAGAAAGATGATGACTAATTCACAAGCCACAGAGATTTCG10.9523809523809524No Hit
GAGGACATTAAGTGTATGCAGAAGTCACAATTGTTGGGAGAATAGCACCC10.9523809523809524No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG10.9523809523809524No Hit
GCTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATGGA10.9523809523809524No Hit
TTGTGCGACAATGCTTCAATCCAATGATCGTCGAGCTTGCGGGAAAGGCA10.9523809523809524No Hit
CCCACTTTCAAAGAAAAAGGAGAGTAAGAGACAACATGACCAAGAAGATG10.9523809523809524No Hit
TATAGGAACCTCGGCCTCGCCACTTGGCCTATCGCAGTCCTCAAGAGAAT10.9523809523809524No Hit
GAATGAAGTGGATGATGGCAATGAGATACAACAAGGCAACCAAACGACTT10.9523809523809524No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers