FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R2_E04_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R2_E04_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTTCCTCCACTCCCCTGGGTGACTCTCCGATTGGCCATGTTTCCGATT21.9801980198019802No Hit
ATACTGAATCTTGGACAAAAGAAATACACCAAGACAATATACTGGTGGGA10.9900990099009901No Hit
ATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGACTC10.9900990099009901No Hit
AGTCAACACATATCAATGCATAATCAGGAACGGGGAAATTGTGAAAATTC10.9900990099009901No Hit
GCTCTTGTCTGGGCCCAGTCTCCCGCGCTGTGTCCCAGCTTGTTAGATTT10.9900990099009901No Hit
ATATTACCTAGAGAAAGCCAACAAAATAAAATCTGAGAAGACACACATTC10.9900990099009901No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCC10.9900990099009901No Hit
GCCGAAAATAGTCAACCCCCATGAGAACGGCATAAATCCCAAGTACATCA10.9900990099009901No Hit
TTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATG10.9900990099009901No Hit
GCTTTGGAGTGTCTGGAGTAAATGAATCAGCTGACATGAGTATTGGAGTA10.9900990099009901No Hit
TCGGAGGACTTCTGTCAGCCTCCAGCCTTTCCCTGCCTCAAGCAGCTGGT10.9900990099009901No Hit
GCAAAGCTCAAGGCTCAGCCACTTCCAGGCCACTTCTGCTTTTGGCCTGG10.9900990099009901No Hit
ATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGGAGCTAATG10.9900990099009901No Hit
ATACGATAGTCTCCAGAAGAATTAATTGAAACTCAATTTACTCAAAATTT10.9900990099009901No Hit
AAACGTCAACACTACAGTCAAAACAAAGGAAAATACCAAATGTACAAATA10.9900990099009901No Hit
GGTAGATATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCT10.9900990099009901No Hit
TTCCATGGGTGTAAAGTGAAGACAGTAATGCCTTTCTTCCCTTGCAGGAT10.9900990099009901No Hit
ACAGAACACAACAATACTCAGAAAAGGGAAAGTGGACGACAAACAATGAA10.9900990099009901No Hit
CCGTGGCCACAGCTGGCGGCTCCTCAGAAGTGAGCCATGGCACAGGCAGC10.9900990099009901No Hit
GTTTATATTGAAGTGTTGCACTTAACCCAAGGGACGTGCTGGGAGCAGAT10.9900990099009901No Hit
CGTGGGCACAGCTTCCCTCTTGGGCTGAGGTCCCGTCTCCAGGGCCACCC10.9900990099009901No Hit
GTGCCAGAGAAGAGCAGCAAGGTCTCGGAGCAGCTGAAGTGCTGCAGTGG10.9900990099009901No Hit
AGCTTGATCAGTCTGGGCTCCCAGTAGGGGGCAATGAAAAGAAGGCCAAA10.9900990099009901No Hit
GTTCATTGAAATTGGAGTAACACGGAGGGAAGTCCACATATATTACCTAG10.9900990099009901No Hit
ACAAAAGCCGATGAAGGGACTTGATCCCAGGACCTGAGCCAAAGGCAGAT10.9900990099009901No Hit
GATCATCAGTCAAGAAAGAAGAAGAAGTGCTAACGGGCAACCTCCAAACA10.9900990099009901No Hit
ATGCAATACAAACCAGAAGCAAGTTAGACAGAGACTCTAGGCATGACTAT10.9900990099009901No Hit
CTGCAGGGCTACTGAATACATAATGAAGGGAGTGTACATAAATACGGCCT10.9900990099009901No Hit
TCCCAGGACTCAGTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTC10.9900990099009901No Hit
CTCCCTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATC10.9900990099009901No Hit
AGTAAGGGAGTGGCTGCCACTCCTTCCTCCTCCAGCACACGGCCCCTCCA10.9900990099009901No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT10.9900990099009901No Hit
TTGTAGATGTAAACATTGCAGTAGCCGTGATTACACTGTCCTTTAAATTA10.9900990099009901No Hit
TCAGAGAGCTGGCTGACCTTTCATTTAACTGTGTGCCTGGATAAAACCTC10.9900990099009901No Hit
AGCAGGAAGGGCTCTATCTTCTTTTCCTCAGGCCCAGCTTTGGTTCTCTC10.9900990099009901No Hit
GTCATACTCCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCA10.9900990099009901No Hit
CTCCCGCTTACTATCAACTGCATCAAAGTCCAGGTTGCCTTTCTGAGAAT10.9900990099009901No Hit
GATTCCAGCTGGGCTGCAGGCAGCTCTGGGACGGCATAGGGCAGGCCCTC10.9900990099009901No Hit
GCCTGTGAATGCTCAAACTGTGTAAGTATATATGTATGTATATACAGCTC10.9900990099009901No Hit
CAATCCGGGCCCTAGACACCATGGCCTCCACCATGCTAGAAATTCCAACC10.9900990099009901No Hit
AAATCAACCCGAGTGGTTCAGAAACATCCTGAGCATGGCACCCATAATGT10.9900990099009901No Hit
CAGATTGGAGGAGTAAGGATGGTGGACATCCTTAGACAGAATCCAACTGA10.9900990099009901No Hit
ACATAATTAGATACTTGGTAAAGACATTTTGTTCTCGGTGGTGGTGGCGG10.9900990099009901No Hit
TTCGTATACTTTGTTGAAACTATAGCTAGGAGCATTTGCGAAAAGCTTGA10.9900990099009901No Hit
CAGTTGCTGCCGGTTGATTTCTGTTTAATGTCCAATCATAAGTCTGGCGA10.9900990099009901No Hit
GCATAGTGTTACGCAGTTAAAGCATCAGTCACAAGGGAAAATGAGCTTAT10.9900990099009901No Hit
TCTTTATTCAGTAGGAGCTACTGAGTGGCTGACAGGAAGGAGAGCCCTGG10.9900990099009901No Hit
GCAATTGACTGCTCGTCTCTCCCGATTACAATCAACTGGATCAATATCCT10.9900990099009901No Hit
CTCATCAGGATGGCTACTAACAAAAACAAACAAACAAACAAAATAACAGT10.9900990099009901No Hit
ATATTACAGCGAGGAGGCACTTCCACAACTACCATGTCTCATCACTGCCA10.9900990099009901No Hit
TGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATGAGGCCCA10.9900990099009901No Hit
GCTTGCTAGCATTTCTGCTGGTATTTGTGTTCGAATCTTAATTCTTTTAA10.9900990099009901No Hit
CTTCTGAAATCCTAATGTTAAATACATATTCTACACTGTAGAGCCCCATT10.9900990099009901No Hit
GGGCAACATCTTCTCCTATTTCATCAAGTTCTATCCAGCTTGAATCAGTC10.9900990099009901No Hit
CCAGCGAAGTCTTGGGCAGTTACATCCAGGCTTGTGAAAACCACCCAGAG10.9900990099009901No Hit
TCCTCATTGCATGTGAATGTGAGCGGCTCAGGGTTTAGGATCCTGGGAAG10.9900990099009901No Hit
CAGATGGCCAAGCGCCGACTGCAAAGTCAGAGTTTCTTTCGCAACCTCGT10.9900990099009901No Hit
GGCTAGGGTGACTGGAGATCCTGGTCGCCCAGGATGGCAGCGGGGTCCCA10.9900990099009901No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.9900990099009901No Hit
CTATGAAGCTGGGTGTACGAATACCTATTTGAGCCCCTGCTTTTAATTCC10.9900990099009901No Hit
GAAATAGAAGAGATACAAATTTGGGTTCACACATGTGGAATTGCCCAGAG10.9900990099009901No Hit
CTCCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCATGTCAA10.9900990099009901No Hit
GTCAAATGTCCCAAGCACATCCCGCATTTGCTGGAACAGTGTCCTTACGA10.9900990099009901No Hit
CAGGTAATCTGAGGGGGCGTGGTGTCGTCCTCAAGAATGGTTCAATTTTG10.9900990099009901No Hit
CATTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTC10.9900990099009901No Hit
TCTTAGTTTAGCAACTTAGGATTTCAAATGCCTGATTTTTGAGGGAAGGG10.9900990099009901No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT10.9900990099009901No Hit
CAGTTAAACTATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCC10.9900990099009901No Hit
TCTCAGTTCCTTGCGTTGCACTGACTACTTCGGGAGACAATAGTACGTAG10.9900990099009901No Hit
GTTCCAACTCCAGTATTTAATAAGTTAACATTTTCATTTATTTCATAGTT10.9900990099009901No Hit
GCATTAAGCAAAACCCAGGGATCATTAATAAGGCCCGCATCGAATGCTTA10.9900990099009901No Hit
GGCAAAGGCTATGGAACAGATGGCTGGATCGAGAGAACAGGCCGCGGAGG10.9900990099009901No Hit
GCCCAAAATGAGAAATCCTCTCAGGACAGCAGACTCCACCCCAGATGTGC10.9900990099009901No Hit
CTCTCCGATTGGCCATGTTTCCGATTTGTTTTCAAAGAATTCCTTGGTCA10.9900990099009901No Hit
GTACATAAATACGGCCTTGCTCAATGCATCCTGTGCAGCCATGGATGACT10.9900990099009901No Hit
GTGTGGTACCCACACAAGACCCCTTGTGCACTGCAGCTCCTGCCTGACTG10.9900990099009901No Hit
CTGCATCAGCCATGCCGTGAATGTGGTACCGACTGGTAGACACCTCTGTG10.9900990099009901No Hit
ATGAAATGCAGGATAACGGAAGGCAGAAAGGTATCTCTCATCTTCCCGCC10.9900990099009901No Hit
CAGTCAGAGGTGATCTGAATTTCGTCAATAGGGCGAATCAGCGATTGAAT10.9900990099009901No Hit
TCATATAAGTTCTTCACATTTGAATCGTGGTAGTCCAAAGTTCTTTCATT10.9900990099009901No Hit
CTTTGTAATCATACAAATCAGGAAGAAATTTAGGCTTCTCTACCCCTGTT10.9900990099009901No Hit
CCTCCATACAGCCATGGAACAGGAACAGGATACGCCATGGACACAGTAAA10.9900990099009901No Hit
ACTCAGAACAGTCCCCTGGATACAAGACTGATGCCCGAAGGGTACAGTCA10.9900990099009901No Hit
TAATCACTCAATGAGTGACATCGAAGCCATGGCGTCTCAAGGCACCAAAC10.9900990099009901No Hit
GGGGAAAGCTATTAAGGCGGATCAGCCACACCCTGGAACAGGGCTGTCCA10.9900990099009901No Hit
GCTGAGGCAATAATTGTGGCCATGGTATTCTCACAGGAGGATTGCATGAT10.9900990099009901No Hit
GGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGT10.9900990099009901No Hit
CCCAATAAATTAGATTTTTAAAAAATCATTTGTGTGTGACATACTTGACT10.9900990099009901No Hit
GAGTACAGCTAGCCTCCCATGGGCCATTTCCTTGAAAGGACCCAGTAGGG10.9900990099009901No Hit
GTGTCAAATGTCCCAAGCACATACCGCAGTTGCTCGAACACGGTCCTTAA10.9900990099009901No Hit
GAGAATACCATGGCCACAATTATTGCATCAGCAATTGACTGCTCGTCTCT10.9900990099009901No Hit
CCTATATGTGTATCTGTAGTCTTTGATGAACAATTGAAGAGCCATCTGGG10.9900990099009901No Hit
ATCTTGGAGGTTCCATTGGTTCTCACATATAGGAACATGGGCCTCGACAC10.9900990099009901No Hit
TTACAGGAACTATGCGCAAGCTTGCCGACCAAAGTCTCCCACCGAACTTC10.9900990099009901No Hit
TCGTTTGACTTATCGGAAACCTTGTCCTGTATTCAGACGCTACTCGGTCT10.9900990099009901No Hit
CCTCAAGATGGGTCTGGTGTTCTACCCATGTTTGTTGCAAGTGTCAGGGT10.9900990099009901No Hit
GAATAGCTGTTGCTCTTCTCCCAACCATTGTGAATTCTGCATACCCTTCA10.9900990099009901No Hit
CTCTCATCCACTTTCCGTCTACTCTTCTATATATGGGTCCTCCTGTTTTC10.9900990099009901No Hit
GCTAGAAAGAGAATTGGTCCGTAAAACAAGGTTTCTCCCAGTAGCCGGCG10.9900990099009901No Hit
TGTTTGTTATGGGGTCCGCGGTGGCGGTGAGCACAGAGGACGCTGGTCAA10.9900990099009901No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers