FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R2_C12_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R2_C12_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTAGATAGTGTGTGATTCGCTTCAATTAGAACCGTTTTTATTGCGTTAT14.761904761904762No Hit
CCATCTCCCACCCACTTTCAAAAGAAAACCACATCAAACAGGAAATACCA14.761904761904762No Hit
CCTCGGGTCCAAGGTGCCCTGGCACTCCAGTTTCGTCCTCCATGGGGCAT14.761904761904762No Hit
GGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCAGGATCA14.761904761904762No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTG14.761904761904762No Hit
ATTCCAGAGAGGAATGAACAAGGACAACCCCTCTGGAGCAAAACAAACGA14.761904761904762No Hit
TTTATGTAGTGCTAGGGTATTTATTCTGGTTTACAAACGACCTCTAGTCC14.761904761904762No Hit
ATGAAAGAACATTTGAATACCACGATTCAATTCTGAATATCTTATATGAA14.761904761904762No Hit
GCAAGGTCTCAGTTGGTAAGTTCCATGAGGTATTCCTTGACTAAGGCGGG14.761904761904762No Hit
TTATTATACTCATAACTGTGATGTCTGTGATTTTGGAGGTAACTCACTTC14.761904761904762No Hit
CACCAAGTCTTGAGGAATTTACAAAAATATGAAAAATTGCATTTCATGAA14.761904761904762No Hit
GGCGGGCCCAGACCCCAGCGCGTGGAGACGGGTGGTGCATTGGCGTGCGC14.761904761904762No Hit
ACTGAATTCCGAGCCAGGAATCTGGAGGGATTTTTAGGGGATGTGTGCGT14.761904761904762No Hit
GTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGACCACAGAAGCT14.761904761904762No Hit
CTTTCTTCTCTTTTGTTATTGCCAGCTGTGACTCTGATGTCAGTATTCTT14.761904761904762No Hit
TATCATCTCTTTTTGCTTCTCCTACTCTCCTGCTGGTACTGAAATGATCA14.761904761904762No Hit
AGATATTCCCCAAGACAAGTTCATGGCCCAATCATGACTCGAACAAAGGT14.761904761904762No Hit
CTCTAATGGTATATTTTATGTTATGTAACCTTTACCGCAATTTAAAAAAA14.761904761904762No Hit
GTTTTTGTTTGTCCATTACATGGGGGCCTCGAATAGGGGATACACTCATC14.761904761904762No Hit
CTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGA14.761904761904762No Hit
ATATAATTCTTTATTTTATTTATTTTTTAGATAGATAGATTGGCGGGGGG14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)