HTGTLBGXG_n01_S2_R2_B05-FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTGTLBGXG_n01_S2_R2_B05-FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1650059
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATATACATATTATTAGGGCAGAGTCAACAGTTTTAAGTGAGCGCTCT	2920	0.17696336918861688	No Hit
ATATTAGAGAAGATCTAAATAATTGGAAAAAACATCCTGTGTTCATGGAC	2451	0.14854014311003425	No Hit
TCCCTGGACAGGCCGGCTGGGACATCACAGCAGGTGCTACAGCCTCCCGA	2420	0.14666142240974414	No Hit
CCCCAATAGTTGACGTTTCTATAACTTTAATTCCTCGGGCTTTTGGCCTT	2323	0.1407828447346428	No Hit
CCATATGGATGAAGCAGACATCCTGGGGGACAGGATTGCCATCATTTCCC	2199	0.13326796193348237	No Hit
GTATTAACTCTGAATAATAACGAGTCTACGTGGATGCCCCATCCTACCAA	2040	0.12363194285780084	No Hit
GTCTAGGGGAATCCCAAAATTTCTAGCCTGGGCAATCAGAAGGATTCGAG	1974	0.11963208588298964	No Hit
GTATAAAGTAGGTAAACCTCTAGCTTTAATCTTTTGCCATCTCTGATCTC	1914	0.11599585226952491	No Hit
GTGTAGGGTGACCTGACTCCATCCCCACTCCAGAACTTGGCCTCAGCACC	1871	0.11338988484654185	No Hit
GTCTTAAGTACTATTGCTTTATAGTAAGTTTTGAAATCAGGAAGTGGGAA	1842	0.11163237193336722	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGGACG	45	1.2318906E-6	80.57042	145
AGCGAAA	845	0.0	78.0937	1
TATACCG	45	1.1929976E-4	64.45634	5
GCGAAAG	1195	0.0	56.433006	2
GTTGACG	655	0.0	52.021465	9
TATATAC	840	0.0	50.932014	3
CCGTCCG	45	0.009633213	48.34225	145
TGGATCG	45	0.009633213	48.34225	5
TAGTTGA	705	0.0	48.332	7
CATCGTG	45	0.00964129	48.332	7
CGAAAGC	1520	0.0	45.797924	3
CCCCAAT	770	0.0	44.262756	1
CCAATAG	825	0.0	43.947502	3
CATACCG	120	1.971639E-7	42.29947	5
TAGAGTG	590	0.0	41.787373	5
TTATATA	1020	0.0	39.811268	2
CCCAATA	925	0.0	39.196423	2
GCTAATA	100	1.3900835E-4	36.257786	1
ATAGTTG	975	0.0	35.698895	6
TACATAT	1150	0.0	35.303375	7