FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R2_B04_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R2_B04_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCATGTGGAAGGGGTTGCCAAGCAGAGGCGAGCATACTCGCCTGGCAGA10.8849557522123894No Hit
CTATCACGCTGTTCCCGCGGGTTGACCGTGTCTTTATATTGTACTCATGG10.8849557522123894No Hit
GATCCAGCCAGCAATGTTACATTTACCCAAATGCAATGGGGCTACCCCTC10.8849557522123894No Hit
GCCCCTGGCTGCCTCAGTCAGTAGGGCATGTGCCACAATCAGGATTCCGG10.8849557522123894No Hit
ATTCTGTAAACAATGCTGTGGTAATGCCAGCCCATGGTCCAGCCAAAAGC10.8849557522123894No Hit
GATAAGGTGTTTTCTCCAAAGTCACCCCCACCCTCCCAGCCAGTGGTTCC10.8849557522123894No Hit
GTTAGGCTCTTTCCAGCCAAAGAATGTCTTCATGCATTTGATTGCATCAT10.8849557522123894No Hit
GATTGGAGGAGTAAGGATGGTGGACATCCTTAGACAGAATCCAACTGAGG10.8849557522123894No Hit
GCAGGGAGCCCAGCAGCTTCTTGGCCTCCTGCATGCGCTCCCCGAGGTGC10.8849557522123894No Hit
GTCATATTGCCACAAGTCTTGCATGGTGCCCAAGCTGAAATTTGAATGCA10.8849557522123894No Hit
AAATAAGATAATCCTTAAAAAGTATCACCCAAAACTCTGGCTTTTGTTGA10.8849557522123894No Hit
ATTCACATGCCTTATTGAATTCATTTTGGACCCAGCTTGCTAGAGATCTG10.8849557522123894No Hit
TCACAGAGCTATGCCAATAAAATCTGTTAAGAAGTAAAGCTCTGAAGTAG10.8849557522123894No Hit
TATCCGAGCGTAGGCGTAAAGGGAGGACAGTATCGTATTTTTGTAGCGTA10.8849557522123894No Hit
AACTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATG10.8849557522123894No Hit
GTGCTAGTCAACACTTATCAATGGATAATCAGGAACTGGGAAATTGTGAA10.8849557522123894No Hit
GACGAGAAGATCATTTGAGTTCAAGCAGCTGTGGGATCACACCCACTCAA10.8849557522123894No Hit
GCTAAAGAAGTTTCCAAATTAGAGTTATTTTCTCTGCAAAATAAAGAAGG10.8849557522123894No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA10.8849557522123894No Hit
CAATTTTAGTGACTGCATCGTATTTTCTTTGATGGCTGTACCACAGTTAT10.8849557522123894No Hit
GTCAGGAAAGGACAACAGAGAGGAATGGAGCTCAAAACGTGCAAGTGGTT10.8849557522123894No Hit
GATTAGAGGTTTCGTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCG10.8849557522123894No Hit
GTCATCAATGATGTGGGAGATCAATGGCCCTGAGTCAGTGCTAGTCAACA10.8849557522123894No Hit
GTCCTCAGACTGCTCAGTGAGTGACCAGGGTCAGTGCTAAGGGGGCAGTG10.8849557522123894No Hit
GATCCGTCCAGACTCGAAGTCGCCCCTGGCATCAATCCGGGCCCTAGACA10.8849557522123894No Hit
ATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAG10.8849557522123894No Hit
GTCCTACCTAAGGGCTTGGGGTAGGCAAAAACAGATGCCAGGGAACCCCC10.8849557522123894No Hit
AGCTTGAATCAGTCAATTCACATGCCTTATTGAATTCATTTTGGACCCAG10.8849557522123894No Hit
GTAAAAGACATTAGCAATGTTGGAGAGGTTTCTTGTGGCAGTTCACATAC10.8849557522123894No Hit
GATAGTATCTAGTCAATAGGGTTATGGGGCTCAGATGAATTAATATTTGT10.8849557522123894No Hit
CTCCTACTCTCACCATTTCTTCCCCACTTCTCTCTCTCCCTTTCTCTCTC10.8849557522123894No Hit
AGTATAAACAGTGAGAAGAGTCTAAGGAAAATACTTGTAAAGGCCCTTGT10.8849557522123894No Hit
GAATACCACTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGG10.8849557522123894No Hit
GTTCTCAATAATGGTCAACAGGAGATTGTCCCCATGAAAAAGGCGCAGGC10.8849557522123894No Hit
GTCCCAGCAAGGACGTCATCCACTGGGCCCTCTGGCATCCTCTGAAAGGT10.8849557522123894No Hit
GAACATTCGAGGATTTTGATTTTCATTCCACTTAGTGTTGTCCCCAGTGA10.8849557522123894No Hit
CATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTC10.8849557522123894No Hit
TCCTGTGCCTCCTTGGCGCTGAGATCTGCATGGCCAGGGTTTGTATCTAC10.8849557522123894No Hit
GGAATAACTAGACCCCTACTGAATAAAGGAACACTGGGAAACAGAATGGG10.8849557522123894No Hit
CCATAATGTTCTCAAACAAAATGGCAAGACTAGGGAAAGGGTACATGTTC10.8849557522123894No Hit
GGAGAGATGAAGCCATGTCGAACCTGACAAGGGAGGCATCATGTGATGAC10.8849557522123894No Hit
ATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATT10.8849557522123894No Hit
GAATCAACATGAGCAAAAAGAAGTCCTATATAAATAAGACAGGGACATTT10.8849557522123894No Hit
GCTAATGGGTCTGCTGACACTGCTGCTCTTCTTACTATGTTTCTAGCAGC10.8849557522123894No Hit
ACTGGGAGCCCAGACTGTTCAAGCTTTTCGCAAATGCTCCTAGCTAAAGT10.8849557522123894No Hit
CCACCCTATTTCCTCAAATTTCTGTCCCGATTGCTCTCGCCCCTTTTCAT10.8849557522123894No Hit
ACTATACTGTATATATGAAACTAATATCACACTGTATGTTAATTACACTG10.8849557522123894No Hit
CCATCATTCTTATAACTTCTGTTCGCATGTCGGATGTCCGTAGTTCCTTG10.8849557522123894No Hit
GAACTCATCCTTTATGACAAAGAAGAAATAAGGAGAGTTTGGCGCCAAGC10.8849557522123894No Hit
GACAAAAACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTG10.8849557522123894No Hit
ATGAAAAGAAGGCCAAACTGGCAAAAGTTGTGAGAAAGAAGAAGACTAAT10.8849557522123894No Hit
GTCCAGGCTGAGGTGAGTCTGTGGGGAGCATTCAAGGGTTGGTGAGGCCA10.8849557522123894No Hit
ACTCTGGAGATTGTTCAAGAATGTGTTGGTATTTGGCCAGCTGTGTATGC10.8849557522123894No Hit
CCCAGTAGGGGGCAATGAAAAGAAGGCCAAACTGGCAAATGTTGTGAGAA10.8849557522123894No Hit
GAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAGACACT10.8849557522123894No Hit
GTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCTAGACACCATG10.8849557522123894No Hit
GAAGTGGGCACTCGGTGAAAATATGGCACAAGAAAAAGTAGACTTTGATG10.8849557522123894No Hit
GAGTTGGAACAATAGCAATGGAGTTAATCAGAATGATCAAACGTGGAATC10.8849557522123894No Hit
ATTCTCTTTTACCCCAAGGACCTGATAGATGGGAAAGCTTATCTAAAGGA10.8849557522123894No Hit
AAACAGAATAGAAGTCATTTGGAGTCATTTGGGGGTTGTTCCTGATAGCG10.8849557522123894No Hit
ACTCAAAGCAACTCACTAGTCAGCTAGACATTAGATCTTGCTTTTTAGTG10.8849557522123894No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTTG10.8849557522123894No Hit
AGTAAGAAGAGCAGCAGTGTCAGCAGACCCATTAGCATCTCTCTTGGAAA10.8849557522123894No Hit
CATTCACATCTTTTCATTCACTGGAGAGGAGATGGCCACCAAAGCGGACT10.8849557522123894No Hit
GATGTCAGTATTCTTGCCCCCACTTCATTTGGGAAAACAACTTCCATAAT10.8849557522123894No Hit
ATGTTCCTATATGTGAGAACCAATGGAACCTCCAAGATCAAGATGAAATG10.8849557522123894No Hit
GTGTGAAATTACAAAGCAAGAATTCACTAACCGAAATAGAGGTCCCTAAA10.8849557522123894No Hit
GCATCATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACT10.8849557522123894No Hit
TCTTTAGAGTCAAGAAAAGGCATCATTGCATTAGCAAAAAGGGAGGGGGA10.8849557522123894No Hit
ATTGTTTACAGAATCAATCTCTTTATGACTGACAAAGGGAGTAAGGGGAT10.8849557522123894No Hit
CCTGAGGAATTGGAATTCTCCGAAAACTGTTCTTTCGGCTTTTCTTTGGC10.8849557522123894No Hit
CAGGCACGCTGAGAAGGTTAATTTTTTAAAAAAGTGAATTTGTTTTGTCA10.8849557522123894No Hit
AGCATTTGGAGCAAGTAGATGGTCAACAAATTTTAGCTATTATTTTCATG10.8849557522123894No Hit
CCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAGTACAGT10.8849557522123894No Hit
TCTTACCACAGAGCGACAACTGAAAGAAATCCAACACAGTTAATGTGCGT10.8849557522123894No Hit
CTGAAAGGTGGTGCAAGGGACCTGGGGTTACCGACGTCCCCCAAGGCAGG10.8849557522123894No Hit
TTCATGTACTCTTATTTTCAGTGTTTGGAGGTTGCCCGTTAGCACTTCTT10.8849557522123894No Hit
GTTCTATCCAGCTTGAATCAGTCAATTCACATGCCTTATTGAATTCATTT10.8849557522123894No Hit
GCTAGAGATCTGGGCTCTGGCTCATCACTGTCATACTGTTTAAGGTCTCC10.8849557522123894No Hit
TCTTTGCTTCTGTCCCAGCAAGGACGTCATCCACTGGGCCCTCTGGCATC10.8849557522123894No Hit
TCAGAATTCATGGCACGCTATCAGGAACAACCCCCAAATGACTCCAAATG10.8849557522123894No Hit
CTCCCTGAAGGTCTGTGAGAATTCTCGGTGATAGGAAAGAAATAGAACTT10.8849557522123894No Hit
GTCTATATGCGTCTCCACAACTTGAGGGGTTTTCGGCTGAATCTAGAAAA10.8849557522123894No Hit
TTCTAGCATGTACGCCACCATCAAGGGAGCAATTTTACAATCCTGGAGCT10.8849557522123894No Hit
GAATAAGAGAGGCGATCTAAGAAGAGCACTGACATGAAATACTATGACCA10.8849557522123894No Hit
GCCAGACGCACCACATTCCCGTATACTGTAGCTCCTCCAGACAGCCATGG10.8849557522123894No Hit
GATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGA10.8849557522123894No Hit
CCACTGAAATTTCCTTAATTATATGGTTAGAGGTATATAGTTAGGAATGT10.8849557522123894No Hit
AGGGGTGTGATAGGGATCTTCAACTACCAGAAGGGATGTCCTGTGTGACC10.8849557522123894No Hit
GGCCATGTGCTAGGCTGGCTCTGGGGTGACGTGATATATACTTGCAGGTG10.8849557522123894No Hit
GATGGAGAGAGTGCGATGCGAAAACGCTACCACGACGGACAAGGCCCGGG10.8849557522123894No Hit
CCCAGCAGCGCGGTGGCTGGGTGGCGCAGTCGGTTGGGGTGCGGCCTCGG10.8849557522123894No Hit
ACCGATTTGAGATAATTGAAGGAAGAGACCGAATCATGGCCTGGACAGTG10.8849557522123894No Hit
GGTGAATTAATTCTCATGTTACAGGTATGCAGGATCAGCCCCAGAGATGT10.8849557522123894No Hit
CTACTGGGAGCCCAGACTGTTCAAGCTTTTCGCAAATGCTCCTAGCTAAA10.8849557522123894No Hit
GACAAGTATAGCATGGAAGGGAGAAGAAAGAGAAAACAGAGAGGCAGAGA10.8849557522123894No Hit
GGTGCTGTCATACTGAGATTCTCATAAGACCTTCAACAAATTTAAACTCA10.8849557522123894No Hit
GCAGGGCTACTGAATACATAATGAAGGGAGTGTACATAAATACGGCCTTG10.8849557522123894No Hit
GTGATAGCTGGGCCCTTTCCCTTCCTGAGACAGCCTTTGCCGCTGTGGTC10.8849557522123894No Hit
ATTCTATAAGGGATGCACTATTATTACCCCCATTTTTTTTTTTTTTTGGA10.8849557522123894No Hit
CGCAAGGAACTGAGAAGTTGACAATAACTTATTCGTCATCAATGATGTGG10.8849557522123894No Hit
CATCAGGGCTCATGAGAACCCTCTTAGTGACACAACTGCCTTTCTAGCTG10.8849557522123894No Hit
GCTTAAAATGGGAGCTAATGGATGATGATTATCGGGGAAGACTTTGTAAT10.8849557522123894No Hit
TTATGAAAGAATGTGCAATATCCTCAAAGGAAAATTTCAAACAGCTGCCC10.8849557522123894No Hit
GTCTAAGGATGTCCACCATCCTTACTCCTCCAATCTGTGTGCTGTGGCAC10.8849557522123894No Hit
CAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGA10.8849557522123894No Hit
CACTCAATGAGTGACATCGAAGCCATGGCGTCTCAAGGCACCAAACGATC10.8849557522123894No Hit
AACTCCGGTGGAGAATGACCTGGAGCACAGGCCCGAGGTGCCGCCTCACC10.8849557522123894No Hit
TCCTTTTATAATGAACCCATACAGGTTTGTTTTCCGTCTTCCTTCTTTGG10.8849557522123894No Hit
TAGCTAAAGTTTCAACAAAGTATACGAAACCTCTAATCTGCATCCCAGGT10.8849557522123894No Hit
GACCTGTAAGAGTGCGCAAGCCAGCCTCAAGACTTACCAGAACGAAGTCA10.8849557522123894No Hit
ATGTAAAGTAGATAGTAAGTGAGTAGGTGGGAAAGGCAAAGCCATATAAA10.8849557522123894No Hit
AGAGAATAGTTTCGAACAAATAACATTTATGCAAGCCTTACAACTACTGC10.8849557522123894No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)