FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_H09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_H09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144
Sequences flagged as poor quality0
Sequence length151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAAAGGATAAGGGTAAATGTAACATCTGTATTGAAAGGCCCATTCTACG10.6944444444444444No Hit
CCCCAGATCAACCCGATTGATGGACCACTACCTGAGGATAATGAACCAAG10.6944444444444444No Hit
CCATACAGCCATTGAACAGGAACAGGATACACAATGGCCCCAGTAAACAG10.6944444444444444No Hit
TTCCTGCAGAGCGTCCCCCTCTACCCATGTGGCGTGAGCAGCTCTGGGGC10.6944444444444444No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTTCAATTCAG10.6944444444444444No Hit
GTTGAGAATAGAACGATTCCTCTTGGGAATCCAGGAATGTGTAGTTGCAA10.6944444444444444No Hit
AATTCACAAGACACAGAGATTTCTTTCACAATCACTGGGGACAACACTAA10.6944444444444444No Hit
GCTGAGTAGTCTTGGGTATAAGGCATGCTGCTTAAAATGGGTTTCCTCTA10.6944444444444444No Hit
TATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTGT10.6944444444444444No Hit
TATCTACTCTAGGCTTTCTAAAAACTTTTTCATCAAATCAAAAATAAAAG10.6944444444444444No Hit
TCCCTGGGCCTCCTGACAGTCATGGCTCGCCACTACGAGAGACCTGCTGC10.6944444444444444No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCAGCACTCAGAATGAAGGGGA10.6944444444444444No Hit
GTTTAATCAAGCAACAGATTCAAGTCTAGGGGTATCCGAGCCATATCCTC10.6944444444444444No Hit
CCTCCACTTTTCCTAAAAATTCCAGCGCAAAATGCCATAAGCCCCACATT10.6944444444444444No Hit
GGACAGTATGGATAGCTAATAGTAGCATTGCCACAACATCTTATGTGCCT10.6944444444444444No Hit
GGCCTAAAGGGAGGTGGTCATGGGGAGTTACAGAATTTCAGTTTTGCAAG10.6944444444444444No Hit
AAAGCAGGCAGAGCGGCAGGCAGAGGCAGAGAGAGAAGCAGGCTCCCCAC10.6944444444444444No Hit
GTACATATGATCCCCAGTAGGATACCATTGTCTTAATGCATCAACATTCC10.6944444444444444No Hit
GGCCGTAACATCATTGCTAAGATTGTGCTATTTTTAGGGAAGAAGCTAAC10.6944444444444444No Hit
AATATGGAGAAACTCATAAAATCTAAAATAAAAATTTTGCTGAAATATGC10.6944444444444444No Hit
ACCTACTGTCCTCTATCCACAATTCCAAATTTTAAAAGCCTCTGAACACT10.6944444444444444No Hit
CTGGAAGCAGGTCCAGATAACACATGGCGTTAGCAGACATCTTCTGTCGA10.6944444444444444No Hit
TCTTTTTGCTCATGTTGATTCCCACTAACTTGCAGGTCCTGTAGAATCTG10.6944444444444444No Hit
CCCAGATGCTGTTATATACTGACATAACTGAAGGCATTGATAAATGATTT10.6944444444444444No Hit
GCGAAAGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTC10.6944444444444444No Hit
CTCATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCAATAAGCATCAA10.6944444444444444No Hit
CAGAGAGCGCATCCTCATGAGATGGGGCTCTCCTTCCCCTGCTGTGCGCT10.6944444444444444No Hit
CAATATGCACACATTTGGAAGTTTGTTTCATGTATTCGGATTTCCATTTC10.6944444444444444No Hit
GTAGAAACAAGGTACTTTTTTGGACAGTAGGGATAGCAAATAGTAGCATT10.6944444444444444No Hit
GGTGCAGGAGGAGGACCAGGAGCAGGAATTGGATCAGGTGCAGGAGCAGG10.6944444444444444No Hit
ATACACACACCCACACCCTGTGTGGCTTTCCCAGAGAGAGAGTTGAAGGT10.6944444444444444No Hit
ATGTATGTATGTGTGCGTGTGTGTGTGTCTGCTACATACCTAGAGATGTG10.6944444444444444No Hit
GAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGCATCTC10.6944444444444444No Hit
GTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTC10.6944444444444444No Hit
CCTTCCAGGGTCCCCTGTCCCCTGCCATCTGTGGCCTAGCAGACACAGCC10.6944444444444444No Hit
ATAGTAAGAAGAGCAGCAGTGTCAGCAGACCGATTAGCATCTCTCTTGGA10.6944444444444444No Hit
AACTACTTCAGTGCATGTGTGAGGAAGCAGTTGATCCAAGATGCATTAAG10.6944444444444444No Hit
CATTGAAAGAATATGGGGAAGATCCGAAAATCGATACTAACAAGATTGCA10.6944444444444444No Hit
AGTAGAAACAAGGTAGTTTTTAAACATTTCTAAAATAATTCATGGACATC10.6944444444444444No Hit
GAGAAAGACATGACCAAGGAATTCTTTGAAAACAAATCGTAAACATGGCC10.6944444444444444No Hit
GCGCCGATCACTGGAATCTCTTTCCAGCCTCCCCACCGCCGCGTCTGGCC10.6944444444444444No Hit
GGTCAAGTATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATG10.6944444444444444No Hit
GAGATATGCCTCAGGTTGAGCCCAGAACCCAAGGCAGAGAGACGCCAGAT10.6944444444444444No Hit
AATTGATGGCCATCGGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT10.6944444444444444No Hit
ATTAAGTCCTATTACACAGTACGGCAGCTGGAATTGGAAAACCTTACATC10.6944444444444444No Hit
AACCAGAACATTACTAATGACATACATCTCCACCAAAGGTAATCAGCATC10.6944444444444444No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA10.6944444444444444No Hit
GGTCAAATATATTACATATGTAGATAATAAAAGAACACAGATATCTAATG10.6944444444444444No Hit
TCATTAGTGAGGAAGATACCTGCCTCTGGCTGCCTCTCAGCCCTGGGTGA10.6944444444444444No Hit
TTGTTCAGGCACTTAGGGACAACCTGGAACCTGGAACCTTCGATCTTGGG10.6944444444444444No Hit
GCACATGACTCGGCAGAGATTCACAGGCAGGCGTGGCCCTGAGCCTGCGG10.6944444444444444No Hit
GGGATTCTTCAAGGAAAGCCATAGCCTCTAGAACACAGTCTGTTTGTGCA10.6944444444444444No Hit
GAACAGGATACACCATGGACATTCGAGAAATTTTTCCCTAGCAGTTCATA10.6944444444444444No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCTCAGTCCCGCA10.6944444444444444No Hit
TCCCAGGACTCAGTGATGCTGTGCCATCTATTAGAAGCGGGATTATTTTC10.6944444444444444No Hit
TCCTAAATGTGAGAACCAATGGAACCTCCAAGATCAAGATGAAATGGGGC10.6944444444444444No Hit
GGTCACTCAAACGGGACTGCCAAGTGGACACAGCGTCTGGCAGGAGAACA10.6944444444444444No Hit
GGCTGAGCCCGCCTGGTGGCTGGAAACCAACGGTCTGCCTGGGAATTCAT10.6944444444444444No Hit
GAGGAATTGGGGCCTGCCAGGAAGCTACTCCAACAGCGGGGAGAGGCCCA10.6944444444444444No Hit
ATATAAGTCACAGTATATTTGAGGATTTGGGTTTCTTTCTTTCTTTATTA10.6944444444444444No Hit
GTATTGTAACTGCACAATATCTAAAGGATTTCCTTTGGCTTTTGAAAAGC10.6944444444444444No Hit
GTATTCTCACAGGAGGATTGCAGGATCAAGGCAGTTAGGGGCGATCTGAA10.6944444444444444No Hit
TTCCTGAAGTCTTCTTAAAATGGGAGCTAATGGATGATGATTAACGGGTA10.6944444444444444No Hit
GGAAGGCTAATAGATTTCTTAAAGGATGTAATGGAATCAATGAACAAAGA10.6944444444444444No Hit
ATTTAGATGCCTTTGCCTTCTGCCCTATGTAGCAAGATTCAAAACTGTTC10.6944444444444444No Hit
AAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTTTGCCG10.6944444444444444No Hit
GTCCAAGATTCAGTATCGAGACTCCCAAGACCGTACTTAGCATGTTGCAC10.6944444444444444No Hit
CATCCAACACGGGGCTCCAACTCATGACCCCGAGATCAAGAGCTGTATGC10.6944444444444444No Hit
CCATACAGCCATGGAACAGGAACAGGATACACCATGGACACAGTAAACAG10.6944444444444444No Hit
CAGCATCGGTCTCACAGACAGATGGCTACTACCACCAATCCCCCAATCAT10.6944444444444444No Hit
CATTGATGCTTAATGCTGGGCCATATCTCTTGTGTTCTTTGCCCAAAATG10.6944444444444444No Hit
TAACTGCCACCCTCTAAGATTCTGGGGAGCCTGGTGGGATGCTCAGGGCA10.6944444444444444No Hit
GAATTGGAGGACATGGGAGTCCATGCAGGTGCAGCTGGGGAACGGGAAGC10.6944444444444444No Hit
GGCTAAAGGGAGGGAGCTGGGGCCCTAGAGCCAACAGAAGGAGTCATGTC10.6944444444444444No Hit
GAATTGACTGATTCAAGCTGGATAGAACTTGATGAAATAGGAGAAGATGT10.6944444444444444No Hit
GTTGAGGATATGCAAACACCCAAGCCTCGGCCGAGGCCTCTTCTGTTGTT10.6944444444444444No Hit
ATCCTGTGTGCCGCCAGCCACCCCTGCTCGCAGGAGATGGTTTACCAAGA10.6944444444444444No Hit
CACATAATGCCCACCACCACAGTACAGTTTAAGTTCTGGAACAAACATTT10.6944444444444444No Hit
GGTTAGATTTTCTAGTGCTATGTTAAATAAGAGTGGTGAGAGTGGACATC10.6944444444444444No Hit
GGGCAGTGGGAGTGGGAGAAGCAGGCTTCCCACTGCGCAGGGGACCTGAT10.6944444444444444No Hit
CTCTTTATGACTGACAAAATTATCCTCAGGTAGTGGTCCATCAATCGGGT10.6944444444444444No Hit
ATTGTCCCCATTTCACAGGGGAGAAAACAGACTTCAAGTGACTTGCCTAA10.6944444444444444No Hit
ACTCATGTCAGCTGATTCATTTACTCCAGACACTCCAAAGCTGGGTAGCT10.6944444444444444No Hit
GAATCAATATCTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCT10.6944444444444444No Hit
GCCAAGGGGGGAGGGGAGTGTCTCCATTTCTACAAAATACGAAGACCTGA10.6944444444444444No Hit
TAATTAAACAAATTAAGCCGACACAGGCAAATATTAGACCAGTACTTTGC10.6944444444444444No Hit
ATACGAAGACCTGACATTTAATGAGTACTTACTATGTGATAATCATGCAA10.6944444444444444No Hit
TTACATAGCTATCATCATCATCATCATCATCATCATCATCATCATCACGA10.6944444444444444No Hit
GTTCGGGTCCACATTCCCATTTAGGGCATTTTGGACAAAGCGTCTACGCT10.6944444444444444No Hit
GGGTAATGGGTCTGTCTTGCCCTCCATTCCTGCAGATAACTCCTCAACAG10.6944444444444444No Hit
GCTTAATGCTGGGCAATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC10.6944444444444444No Hit
AAGTACTGGTAAACGACCTTTCTGAGTCTTTTTCTGGGTTCTTTCCAAAT10.6944444444444444No Hit
GCTTAGCAGTAGCCCCTCTGCTCCAACTCTAGCCGAAACAGTGGTGGTTA10.6944444444444444No Hit
AATCTAGACAAATCAATTCAAAGAAACTGACACAGCAGACACGCCTCCAG10.6944444444444444No Hit
AGTAGAAACAAGGTACTTTTTTGGACAGTATGTATAGCAAATAGTAGAAT10.6944444444444444No Hit
CCTTGAAACAATTGAAGTTGTTCAAAAAACATGGGTAGATAAACTAACTC10.6944444444444444No Hit
ATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCATA10.6944444444444444No Hit
CATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAG10.6944444444444444No Hit
GGTGTGTGCACACATCAACAAATGTGCTCCCATGCAAACACAGGCACATG10.6944444444444444No Hit
GGGGAGGAGCGAACTGTCAAGAGGGTGCGCGGGCCGGAAGAACACCGGGA10.6944444444444444No Hit
GTGTGGGACTTAAGGACCTATCAGGTGGGACTTGGCCCCGGCACATGCAG10.6944444444444444No Hit
GCCTAAAATATAAGTCACAGTATATTTGAGGATTTGGGTTTCTTTCTTTC10.6944444444444444No Hit
TTATAATATTTTTAAAAACTGTAAAGTAGTGTAGAGGATGGCTTGGAAAG10.6944444444444444No Hit
CCATTTGAATGGATGTCAATCAGCCTCTACTTTTCATAAAAATTCCAGCT10.6944444444444444No Hit
AATTTGAACTGCTTTGTGACTATGAAAGGAATACATCTCACCAGAAAAAA10.6944444444444444No Hit
CTTCAATTGTTCATCAAAGACTACAGATACACATATAGGTGCCATAGGGG10.6944444444444444No Hit
ATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCT10.6944444444444444No Hit
CCACTATGCGAGAAATTCCAACCGGTCTCCTATATGAAATGATAGGGAAA10.6944444444444444No Hit
GCTATTGTTCTGCCCTGGTGGAGCCCATCCCCCATGCCAGCACGGTGTGC10.6944444444444444No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT10.6944444444444444No Hit
GTCCCACTGCAGGGCTACTGAATACATAATGAAGGGAGTGTACATAAATA10.6944444444444444No Hit
GCACTTATGGTACATCTGTTCATAATCAAGAATTCCCCTTTGGCTTGTGT10.6944444444444444No Hit
CATTTATAGTTGGATCACACTTTTATAAAACACACTTGGCTTGTACTAAT10.6944444444444444No Hit
CCGCGCAGCAGACGGCCGGACTCTGCGCGAGAATCCCCTGGCCCCGAGCA10.6944444444444444No Hit
CTTCTGCACCTGCTCCTGTTCATGCTCCTGTTCCTGCACCTGATCCTGTT10.6944444444444444No Hit
GTACTAGAAAAGAATGTAACAGTAACACCCTCTGTTAACCTTCTAGAAGA10.6944444444444444No Hit
CCTCCATACAGCCATGGAACAGGAACAGGATACACCATGGACACAGTAAA10.6944444444444444No Hit
TTTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCC10.6944444444444444No Hit
GTATCAGATGGAGGACCAAACTTATACAATATACGGAATCTTCACATTCC10.6944444444444444No Hit
GGTCAAATATATTCAATATGGAGAGATTAAAAGATCTGAGAGATCTAATG10.6944444444444444No Hit
GTAGAAACAAGGGCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC10.6944444444444444No Hit
CACTAAGTCACCAAAAGCCATTATCCGGTTTACCATCTCTACAGCGATAA10.6944444444444444No Hit
GTCAAGAGGGTGCGCGGGCCGGAAGAACACCGGGAGGCAGCCGGAACAGC10.6944444444444444No Hit
GGCAAATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGT10.6944444444444444No Hit
ATGTCAATCCGACTCTACTTTTCCTTTCCAGCGCAAAATGCCATAAGCAC10.6944444444444444No Hit
CCTATATGAACTGCTAGGGAAAAGTTTCACGATGAGATTGGATGTCTTCT10.6944444444444444No Hit
CTTCCTGCAGAGCGTCCCCCTCTACCCTTGTGGCGTGAGCAGCTCTGGGG10.6944444444444444No Hit
GAATCACATATCTTCAGGCTGAAGCTCAGGCCAATTTTGCTTTTAGACTG10.6944444444444444No Hit
TCTAAAATCTGCATCCTAGCCTCCAGCCGCCCTTTGTGCTGCCGGAGGAG10.6944444444444444No Hit
TATTAAATCTATACGCTCTATTGTGTGTATATTTTGGAAGTACAGAGACA10.6944444444444444No Hit
AAACAAGGCATATTTTCATGAAGGACAACTTAAATTCATTATTTTTGCCT10.6944444444444444No Hit
CTCATTAGCTGTTAGGCCATTCGATCTAAAGACTTCTATGGTGTTGGCCA10.6944444444444444No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG10.6944444444444444No Hit
AGAGAATTTCCTATAGGCCAGAACTTCCTGGGCTATTGCTTGGAAACGTG10.6944444444444444No Hit
GTCTTAATGCATCAACATTCCTGCAGTCAAATGTTTGAATCCTTGTATCA10.6944444444444444No Hit
GAGTTACAGTGTCTTTTGTCCCTGAAGCAGGGTCTCCCCGTAGCTCAAGG10.6944444444444444No Hit
TTTTTAAACAATTCGACACTAATTGATTGCCATCCGAATTCTGTTGGTCG10.6944444444444444No Hit
CCACTGTGGACCATATGGCCATAATCAAAAAGTGACTGTGAATGTGAGAG10.6944444444444444No Hit
AGTCAGGATCTATTTCAGGACAGTGAGTGTGGGGTTGGTTGGGAAGTAAA10.6944444444444444No Hit
CCTCCAAACAGCCATGGAACAGGAACAGGATACACAATGGACAAAGTAAA10.6944444444444444No Hit
GGTAGAGCTGCTATCAGTGAGGAAAGATCCATTAGTCCTTTCCATCTGGG10.6944444444444444No Hit
GCTTTGGTGGCCATCTCCTCTCCAGTGAATGAAAAGATGTGAATGTGTTT10.6944444444444444No Hit
CACCAACCATTTGCAGCTGACATCAGTCCGCTGGGTCATCCTCTGGCATG10.6944444444444444No Hit
ATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGAAGTCGAACCT10.6944444444444444No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers