FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_G05_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_G05_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCATGTACTCTTATTTTCAGTGTTTGGAGGTTGCCCGTTAGCACTTCTT15.555555555555555No Hit
CGCGCTGTCCCGCCCGATCTCGGCGTCCTGCCCTCGCCCCAGGGGCGGGT15.555555555555555No Hit
CTGCTGGCTGTGCGCAGCATGCTCTCGTATCTGCTGAGAGACTTGGTAAA15.555555555555555No Hit
CCACAGAGCTCGTCAAGCTACTGCTGTGACTTCTGGTGAATATAGAACCA15.555555555555555No Hit
ACTCAACTTTGTTTTTGAAGGTGGAATTTTTTTTAAATGCAGCATTTTTT15.555555555555555No Hit
CGAGTGTAAAACGAGGGTGGAAAGATGCTATGACCAGACTCTGAAGAGGC15.555555555555555No Hit
GTAGTATACTCTAAAAGGATGACGACACCACCTGTGTATGGAATGAATGT15.555555555555555No Hit
ATTATATATTCAGTAGAAATGCAGTCGGACAGTTGATCTGTAAAATAGTT15.555555555555555No Hit
GTTCATTGATGCTTAATGCTGGGCCTCATTGCCATCATCCACTTCATTCT15.555555555555555No Hit
ATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCT15.555555555555555No Hit
CCCTGAGATCATGACCCGACCCGAAGGCAGCCACTCAACCAAGTGAGCCA15.555555555555555No Hit
CATTAGAGGCATTCACATCCATAGTGAAATTTAACTCTTGGCTTTTACCA15.555555555555555No Hit
ACTTATATGAAAAGGTAAGAAGCCAGCTAAAAAACAATGCCAAGGAAATT15.555555555555555No Hit
TATTAGAAGAGGCCTTATTTTCTCAATTTTCTTCTTTGTTGATTCATTGA15.555555555555555No Hit
GATAATACCAGATCCAGCATTTCTTTCCATTGCGAATGCATATCTCGGTA15.555555555555555No Hit
GGGCACCAGGCGGAGCCGAGAGACCAATGAGTGGTCGAGCTCCCCGGACC15.555555555555555No Hit
GGGCCTCACTCCTGACACCTAGTTCCCAACCTGGCGCTTTCCCACACGTG15.555555555555555No Hit
ATATAAACACTGCCTGTTCCGCCGGCTACTGGGAGAAACCTTGTTTTACG15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)