FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_F09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_F09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTTGTGGCTAATTTTAGCATGGAGCTACCCAGCTTTGGAGTGTCTGG10.6622516556291391No Hit
CTGCTAGTCTCTCCCGCTTACTATCAACTGGATAAATCTCCTGTTTTCCT10.6622516556291391No Hit
CCTGGGTGACTCTCCTAATTGCCATGATTCAGATTTGTTTTCAAATCATT10.6622516556291391No Hit
ACAATAGTACGTTCCCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATA10.6622516556291391No Hit
ACACTTATCAATGGATAATCAGGAACTGGTAAATTGTGAAAATTCAATGG10.6622516556291391No Hit
GCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGAAATACTTA10.6622516556291391No Hit
GTAAAAGAATGAAGATTCGAACACAAATACCAGCAGAAATGCTAGCAAGC10.6622516556291391No Hit
GAAGTGAGAAATGATGATGTTGACCAAAGTTTGATTATCGCTGCTAGAAA10.6622516556291391No Hit
GGGCAATGAAAAGAAGTCCAAACTCGCAATTGAAATGAGAAAGATGATGA10.6622516556291391No Hit
CTAGAAACAAGGACGTATGTGAACATTTCGTCACTAATAGATGGCCCACC10.6622516556291391No Hit
CACCAAATCAATTAGAGAAATTTATACCAAAAAGTTCATATAGGAGCCAT10.6622516556291391No Hit
CCCCAGCGACGCCCAGCTCTGCAGCGAGCCAGGAACTCCCCCGTGAGCGG10.6622516556291391No Hit
GCTTCATATAGCCCCCCAAGATCGAAGGATCCAGGTTCCACGTTGTCACT10.6622516556291391No Hit
CCATTACATCCTTTAAGAAATCTATTAGCCTTCATGACTCATTAGCTGTT10.6622516556291391No Hit
CCCTAAGCCCACTGTGGCCCATATGGCCATAAGCAAAAAGTACACATAAG10.6622516556291391No Hit
GCTGTGGGCGGGCCCATGGGCGGGCAGGTGGCCAGCATTGTGTCCAGAAT10.6622516556291391No Hit
GTAGTTGTATTGTAATATAGTGCTTTTCATCACCTATCAGTCCATTGTCT10.6622516556291391No Hit
TGCCCGTACTTAGCATGTTGAACATGCCCATCATCATCCAAGGACTCAGT10.6622516556291391No Hit
GAGATGGACGGCCCCCCAGGCCCCCCGGGGGCAGAGACCCCACAGGTGGC10.6622516556291391No Hit
GTCCACATATATTACCTAGAGAAAGCCAAAAAAATAAAATCTGAGAAGAC10.6622516556291391No Hit
CACATATAGGTGCGATAGGGGAGACACACAAATTCAGACGAGAAGATCAT10.6622516556291391No Hit
TACACACCCTGGCCATGCAGCTCTCAGTGCCACGGAGGCACAGGCTGTGA10.6622516556291391No Hit
TTGCATTAGAGAGCACATTCTGGGATCCATTCCGGTGCGAAGAAGCGCTC10.6622516556291391No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA10.6622516556291391No Hit
CTGTTAACCTTCTAGAAGACAAGCATAACGGGAAACTATGCAAACTAAGA10.6622516556291391No Hit
ATTGATGGCCATCCGAATTATTTTGGTCGCTGTCTGGCTGTCAGTAAGTT10.6622516556291391No Hit
GATTGATGGACAACTACCTGAGGATAATGAACCAAGTGGGTATGCACAAC10.6622516556291391No Hit
ACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTC10.6622516556291391No Hit
GGACCAAACTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTT10.6622516556291391No Hit
GCATGTACCATCTGACTAGTCTGATTAGCAACATCCATGGCCTCCGCTGC10.6622516556291391No Hit
GGGGTAGAGCGGTGTCAGGAGGCCGCCGGGGGTGAGGGGGGTTGGACGGC10.6622516556291391No Hit
GAGGGGGCGTGGTGTCGTCCTCAAGAATGGTTCAATTTTGGCGTTCACTT10.6622516556291391No Hit
CACTCCGTCCCCTTGCCCAATTAGCACATTATCCTTCTCTCCTTTTGCAA10.6622516556291391No Hit
GAGCTAATCCTCAACCCTATTGCTGCCTTGCATATGTCTACGGCTTGTTC10.6622516556291391No Hit
GTAGAAACAAGGAGAAATTAAACACGAAGCCTTCACTTTTCAGGCCGAGT10.6622516556291391No Hit
GGGTAATGAACTGTACTTGTTGTTGGGCCAGTCCTATTCCACCATGTTAC10.6622516556291391No Hit
GCTAATGGGTCTGCTGCCACTGCTGCTCTTCTTACTAGGTTTCTCGATGC10.6622516556291391No Hit
TATATTACCTAGAGAAAGCCAACAAAATAAAATCTGAGATGACACACAAT10.6622516556291391No Hit
CCTATATAAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGC10.6622516556291391No Hit
CCCAAGACCGTACTTAGCATGTTGAACATGCCCATCATCATCCCAGGACT10.6622516556291391No Hit
GCACTGACATTAAATACGATGACCAAAGATGCAGAGAGAGGCAAGTTAAA10.6622516556291391No Hit
GGTGTTATCTATAGTGAAGCTTTTTTAATGGCTTTCCTTAACTCCGTTAA10.6622516556291391No Hit
GGCCATGGATCCTTCCTCCCTGTCTTCTGTCACCTCCCCTCCCTCCCACT10.6622516556291391No Hit
GCTCGACTAGTGTCCAGTAATAGTTCATTCTCCCTGCTTGATCCCTCACT10.6622516556291391No Hit
GAACATATCGCAAGCATGAGGAGGAACTATTTTACAGCAGAAGTGTCCCA10.6622516556291391No Hit
GACAATGGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGCTCA10.6622516556291391No Hit
GTGTTACTCCAATTTCAATGAACCGGGTCTCTTTGTAATCATACAAATAA10.6622516556291391No Hit
CTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCG10.6622516556291391No Hit
GGCGATCTGAACTTTGTCAATAGGGCAAACCAGCGACTGAACCCCATGCC10.6622516556291391No Hit
CCTTATGGCCCAGTATCTGCTTCTCAGTTCCAGGGTATTGGAGTCCATGG10.6622516556291391No Hit
GGCAAAAGATAATAGTCCCTATTTGCGTGCGATTGGAACAGGCGATCATG10.6622516556291391No Hit
GTTACGTGGACCACTTCTATATAAACACTGCCTGTTCCGCCGGCTACTGG10.6622516556291391No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCCCTCGCGAGATACTC10.6622516556291391No Hit
GATAAAGAACAACATGATAAACAATGACCTTGGACCTGCAACGGCCCAGA10.6622516556291391No Hit
GTCCCTGTCTTATTTATATAGGACTTCTTTTTGCTCATGTTGATTCCCAC10.6622516556291391No Hit
GCTTGGGACATTTGACACTGTCCAAATAATAAAACTTCTCCCCTTTGCTG10.6622516556291391No Hit
GACCAGGCAGTGTTTATATTGAAGTGTTGAACTTAACCCAAGGGACCTCC10.6622516556291391No Hit
CCTTGAAACAATGGAAGTTGTTCAACAAACAAGGGTAGATAAACTAACTC10.6622516556291391No Hit
CTTACTATCAACTGGATCAATCTCATGGTTGCCTTTCTTAGAATAGCTGT10.6622516556291391No Hit
GTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTT10.6622516556291391No Hit
GGGTTAGAGATCAAAGAGGGACCGTACTATTGTCTCCCGAAGAAGTCAGT10.6622516556291391No Hit
CCTTATTTTAACTTGATTTCTGAAGTGGACAGGGCCGAAGGTACCATGTT10.6622516556291391No Hit
CGGCTGCATTGAGGGCAAGCTTTCCCAAATGTCAAAAGAAGTGACCGCCA10.6622516556291391No Hit
GATTTCTGGTGATATATGTAATCATCGCCAGGAACATTCGAGGATTTTGA10.6622516556291391No Hit
GAGTCAGGAAGGCTAATAGATTTCTTAAAGGATGTAATGGAATCAATGAA10.6622516556291391No Hit
CCATATGGCCATAATCAAAAATTACACATCAGGAAGGCAATAGAATCACC10.6622516556291391No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA10.6622516556291391No Hit
TTCTAGGACTGTGGGCTGAACTAAAGGCAGCTACCTAACAAACTGAGCCA10.6622516556291391No Hit
TAATGTCAGTGATCTTATTAGATAGCCTATCTTATTAAGTCTTTGTTTTT10.6622516556291391No Hit
GTCCACATATATTACCTAGAGAAAGCGAACAAAATAAAATCTGAGAAGAC10.6622516556291391No Hit
CTTTTTAACTTGCCTCTCTCTGCATCTTTGGTCATCGTATTTAATGTCAG10.6622516556291391No Hit
ATGCAGATCTCAGTGCCAAGGAGGCACAGGATGTGGTTATGGAAGTTGTT10.6622516556291391No Hit
ACCCTGGGATCATTAATCAGGCACTCCTCGATTGCTACATATAGCACCCC10.6622516556291391No Hit
CACGATATTAAAAACAACAGTGGTAAAGAATAATAAAAATCTTCCTGATT10.6622516556291391No Hit
GGTCCCTGCTCATCAGGAAACCTGCTTCTCCCTCCGCCTGCTGCCCCCCC10.6622516556291391No Hit
AGTTTGGTCCTCCATCTGATACTAATAGCCCTACCTTTGATTGGGTTTGA10.6622516556291391No Hit
CCCCCAAGGCAGGTCCAGGTGGACCAGGGATTGCTCACATTCTGCTGCAG10.6622516556291391No Hit
AAGATGACCTTCTTGAAAATTTGCAGGCCTACCAGAAGCGAATGGGAGTG10.6622516556291391No Hit
CTCCTATTTCATCAAGTTCTATCCAGCTTGAATCAGTCAATTCACATGCC10.6622516556291391No Hit
TCCAGTGCTAGGTAAAGGAGTCATCCCCAGCTCTGAAAGATTCTGTTGAT10.6622516556291391No Hit
ATTCTACAGGACCTGCAAGTTAGTGGGAATCAACATGAGCAAAAAGAAGT10.6622516556291391No Hit
CACCATGGCCTCCCCCATGCTAGAAATTCCAACCGGTCTCCTATATGAAC10.6622516556291391No Hit
GTTCCATTGCAATCCAGAATAGTTTTTCTGGATCCTGGGTTTTGATGGGT10.6622516556291391No Hit
CTATTTTACAATCCTGGAGCTCTTCTTTCTTCTCTTTTGTTATTTCCACC10.6622516556291391No Hit
CTGTTCTCTTTGAATAACAAATGAAGATACATCTGCCCAGTTCCACGTCC10.6622516556291391No Hit
GAGAATGTAGGCTGCACACTGATCTGGCCTGCGGATGCCTTTTGTTGATT10.6622516556291391No Hit
TGGCCGTCCTTAAGTGTTAAAGCTGAATTCTTCAATAACGTTGTCTATTT10.6622516556291391No Hit
GGGTAGCTCCATGCTAAAATTAGCCACAAATCCATAGCGAAAAAAAAAGC10.6622516556291391No Hit
TTATTGAATACTGGAGAATTGCCTCTTACCAGTATCCTCAACCCTGATCC10.6622516556291391No Hit
CTTTGCAGTCATCAAAGTCTACTTTTTCTGGTGCCATATTTTCACCGAGT10.6622516556291391No Hit
GGATTGGGTGATGGGCCTTTCCTTGATCGGCTCGGCCGATATCATAATTC10.6622516556291391No Hit
GGGTTAAGTGCAACACTTCAATATAAACACTGCCTGTTCCGCCGGCTACT10.6622516556291391No Hit
ATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA10.6622516556291391No Hit
GAAGAGGCAACACCCTTGGCCTCGAAATCGAAACAGCCACTCTTGGTGGG10.6622516556291391No Hit
GGGCAACATCTTCTCCTATTTCATCAAGTTCTATCCAGCTTGAATCAGTC10.6622516556291391No Hit
GGATGAGGCTGGAGGGTAAAAATGAGATAGGTTAAGTCTAAATATATACG10.6622516556291391No Hit
ATGATAAACAATGACCTTGGACCTGCAACGGCCCAGATGGCTCTTCAATT10.6622516556291391No Hit
GGGATTCAGGGGATTACAAAGTCTTCCCCGATAATCATCATCCATTAGCT10.6622516556291391No Hit
GGTCTATCCCGACCAGTGAGTACACTTCCCTTTCAAAGTCATGCACACTT10.6622516556291391No Hit
CAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCATA10.6622516556291391No Hit
AGCCTGGTGGACATTTATTCCCAGCTGCAGCAGGAAGTGGGGGCAGCTGG10.6622516556291391No Hit
GCATGTACCATCTGCCTAGTCTGATTAGCAACCTCCATGGCCTCCGCTGC10.6622516556291391No Hit
TCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCGTC10.6622516556291391No Hit
TAGGGAAGACACACAAATTCAGACGAGAAGATCAATTGAGTTAAAAAAGC10.6622516556291391No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA10.6622516556291391No Hit
CAATTACAGCAGACAAGAGAATAATGGACATGAACAAGGACAAACCCTCT10.6622516556291391No Hit
AAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAAT10.6622516556291391No Hit
TTGTCATTGAATACTTGAGCATTGCCTCTTACCAGTATACTCAACCATGA10.6622516556291391No Hit
CCTCATTGCCTGTGAATGTGAGAGGATCAGGGTTGAGGATACTGGTAAGA10.6622516556291391No Hit
CTATGGGATTCCTTTCGTCAGTCCGAAAGAGGCGAAGAGACAATTGAAGA10.6622516556291391No Hit
CTTTTATGTTTTTGGCTCTCATGTCCCATGACCCATTCCCCCCAGCCAGG10.6622516556291391No Hit
TATTTATATAGGACTTCGTTTTGCTCATGTTGAGTCCCACTAACTTGCAG10.6622516556291391No Hit
GGATGAAGATTATCGGGGAAGACTTTGTAATCCCCTGAATCCCTTTGTCA10.6622516556291391No Hit
GATTCAATTCCCAAGTTCTGGAAAAGCACATTTGCATCTTTTTGGAAATG10.6622516556291391No Hit
ACCCGAGACTGGAGCCACACAAATGGGAAAAATACTGTGTTCTTGAAATA10.6622516556291391No Hit
TTCTCATGTGGTTTGACTATGTTAGGCTCTTTCCAGCCAAAGAATGTCTT10.6622516556291391No Hit
AGCGAAAGCAGGTAGATATTTAAAGATGAGTCTTCTAACCGAGGTAGAAA10.6622516556291391No Hit
GTCGCGGCCCATGTTCCTATATGTGAGCACCAATGGAACCTCCAAGCTCA10.6622516556291391No Hit
TTGCTCAGTTCATTGATGCTTAATGCTGGGCCTCTTGTCTTCTTTGCCCA10.6622516556291391No Hit
CTTCCCTCTCTCTCTCTCTCTCTGGCTGCCTCTCTGTCTACTTGTGATTC10.6622516556291391No Hit
GGCCATGATTCGGTCTCTTCCTTCAATTATCTCAAATCGGTGATTCAATA10.6622516556291391No Hit
CCTGGAGTGTACCTCTGCTCCCAGCACGTCCCTTGGGTTAAGTGCAACGC10.6622516556291391No Hit
TAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAA10.6622516556291391No Hit
GGAGAGAATAAAGGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCG10.6622516556291391No Hit
GGGACAGAAATTTGAGGAAATAAGGTGGTTAATTGAAGAAATGCGGCACA10.6622516556291391No Hit
GCCGTGAAGTCACCAAGTCCTCCCAGCAGCTCCGTGAGGCCACTCACACG10.6622516556291391No Hit
GCCCCAAGACGAGTCAACAGCACCACCCAGGAGATGGCGAACCCACCGGA10.6622516556291391No Hit
TCCTTAGACAGAATCCAACAGAGGAACAAGCCGTAGACATAAGCAAGGCA10.6622516556291391No Hit
GTACTATTGTCTCCCGAGGAAGTCAGTGAAACGCAAGGAACTGAGAAGTT10.6622516556291391No Hit
CGAAAGAAGGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGAGAG10.6622516556291391No Hit
GCTGGAACAGTGTCCTTACGAATCCACTGTACAGGCTTCTGGGTGCCTTA10.6622516556291391No Hit
GCAGATACTGGGCCATAAGGACCAGGAGTGGAGGAATTACCAAGCAAAAA10.6622516556291391No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT10.6622516556291391No Hit
CCTCCATACAGCCATGGAACAGGAACAGGATACACCATGGACACAGTAAA10.6622516556291391No Hit
GGGTACATGTTCGAGAGTAAAAGAATGAAGATTCGAACACAAATACCAGC10.6622516556291391No Hit
TTTCTGGAGGGGTGAATATGGACGAAGGACAAGGGTTGCTTATGAAAGAA10.6622516556291391No Hit
GTGTGCTGTGGCACATTTCCAAGAGAGATGCTAATGGGTCTGCTGCCACT10.6622516556291391No Hit
CCCTGGCCTCAATCCGGGCCCTAGACACCATGGCCTCCCCCATGCTAGAA10.6622516556291391No Hit
CATTTGGAAGTTTGTTTCATGTATTCGGATTTCCATTTCATCGACGAACG10.6622516556291391No Hit
GGGTATGAATTTCCTTTTTTAACTAGCCATATTAAATTTTTGTAGAAGCT10.6622516556291391No Hit
GTTAGGGGCGAGCTGAACTTTGTCAATAGGGCAAACCAGCGACTGAACCC10.6622516556291391No Hit
AGATAAACTAACTCAAGGTCGCCAGACTTATGATTGGACATTAAACAGAA10.6622516556291391No Hit
AGATATGCATTCGCAATGGAAAGAAATGCTGGATCTGGTATTATCATTTC10.6622516556291391No Hit
CATTTGACACTGTCGAAATAATAAAACTTCTCCCCTTTGCTGCTGCCCCC10.6622516556291391No Hit
CCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTTGTTGTAATT10.6622516556291391No Hit
ATCTCAAACCTTTCAAATGATGACACTGAGCTCAATTGCTCTCTTAGCTC10.6622516556291391No Hit
CTCTAATGCTAGGTTCCACACTTCCCAGATGGTCTGGTGCCCCAGGAGCT10.6622516556291391No Hit
CCTCTAATCTGCATCCCAGCTGTTGCGATAGCCCTTCTTTTTAACTTGCC10.6622516556291391No Hit
TATTTCATAAAGTTCTATCCAGCTTGAATCAGTCAATTCACATGCCTTAT10.6622516556291391No Hit
GATAATGAACCAAGTGGGTATGCACAAACAGACTGTGTTCTAGAGGCTAT10.6622516556291391No Hit
GGTAATGGTGAAATTTCTCCAACTATTGCTAAATCCTCAGTGACAGCCCT10.6622516556291391No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers