FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_E09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_E09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAAAGCGGACTACACCCTTGACGAAGAGAGCAGGGCAAGAATCAAAACT10.7575757575757576No Hit
TCTGGGCTCTGGCTCATCACTGTCATACTGTTTAAGGTCACCAACATCTT10.7575757575757576No Hit
GGAGACTGTGGCAGTATAAGCCGGGGACTGGGAACTGAAGCCTGCTTTGC10.7575757575757576No Hit
ATCCAAGTAACAGCAAGAATTCTGCTGCAGTAAGCACAGTAAATCTTTAA10.7575757575757576No Hit
CTCCGTGGTCCGCTGTTTAATTGCCGTGCCATCCATTTTGGTCAGGAAAG10.7575757575757576No Hit
GATGAATACTCCAGCACGGAGAGAGTGGTAGTGAGTATTGACCGATTTTT10.7575757575757576No Hit
CTCGGAGATGCAGTTAGTTTATCTGTGAAACTGAGCTCATACTGCCTTCA10.7575757575757576No Hit
GTGTCAGTGCTAGTCAACACTTATCAATGGATAATCAGGAACTGGGAAAT10.7575757575757576No Hit
GCTGCAGAGAGAGGCAAGTTAAAAAGAAGGGCTATCGCAACACCTGGGAT10.7575757575757576No Hit
GTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGACCAGATC10.7575757575757576No Hit
GCTGACATGAGTATTGGAGTAACAGTGATAAAGAACAACATGATAAACAA10.7575757575757576No Hit
GAAGAAAATTGAGAAAATAAGGCCTCTTCTAATAGATGGCACAGCCTCAC10.7575757575757576No Hit
GCGGGCGGCTGAAACCCTCCTGGCGTGCTGCCATGAGGACCAGAAGCCCC10.7575757575757576No Hit
GAGCTTCCATGTACAAATAGTTTAAGGTGCGGGGATGATTCACATCCCTT10.7575757575757576No Hit
CAAAATAACATTCGAAGCAACTGGAAATCTAGTGGTACCGAGATATGCAT10.7575757575757576No Hit
TTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCC10.7575757575757576No Hit
TCTGAAGGTGTCCTACCAGGAAAGCCTGTCCAGATGGATATTCAAAGCCA10.7575757575757576No Hit
GTATACGAAACCTCTCATCTGCATCACAGCTCTTGACATAGACAATCTTT10.7575757575757576No Hit
CCCCAGCTGAATGATGTATATTGAGATGAAATGAAATAAATAAGAGGTGA10.7575757575757576No Hit
GTGTCAAATGTCCCAAGCACATCCCGCATTTGCTGGAACAGTGTCCTTAC10.7575757575757576No Hit
AATAGATTTCTTAAAGGATGTAATGGAATCAATGAACAAAGAGGAAATAG10.7575757575757576No Hit
TCTCCGTGCTTGGGGTCATGTCGGGCAGTATTCCGATCATTCCCATCACA10.7575757575757576No Hit
CTGAAGAGTTTCAGTTTTTACATGGAAGTTCAAACCCACGGATGAACAAG10.7575757575757576No Hit
TACTTACACAGTTTGAGCATTCACAGGCCACTAGAAGACCATCTGTGGAA10.7575757575757576No Hit
GTGGAATGAAAATCAAAATCCTCGAATGTTCCTGGCGATGATTACATATA10.7575757575757576No Hit
ATGTGGGGCTTGGTTTCCAATCAAACAGCTCATGTTTCCAGCATCGCTGA10.7575757575757576No Hit
GCCCTGTCCTCTCCTATAGCCCAAATAAGATAGCTTATGCTTTTGACTGA10.7575757575757576No Hit
AGTAGAAACAAGGACGTTTTTAAACAAATAGACACTAATAGATCTCCAAA10.7575757575757576No Hit
GTGCAGCCATGGATGACTTTCAGCTGATCCCAATGATAAGCAAATGTAGG10.7575757575757576No Hit
GTATTCTTGCCCCCACTTCATTTGGGAAAACAACTTCCATAAACACATCC10.7575757575757576No Hit
GACTGGTGCACCCCAGCTCAACCCGATTGATGGACCACTACCTGAGGATA10.7575757575757576No Hit
ACCCTATTGCTGCCTTGCATATGTCTACGGCTTGTTCCTCAGTTGGATTC10.7575757575757576No Hit
ATTATAAAAAATGACCATGGACCACCACCGCACCAAATGCCACAACAATA10.7575757575757576No Hit
CTTTGAAAAACAATTCGTCCTAAAACAAGCAATAATAGAACAACATTCAC10.7575757575757576No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA10.7575757575757576No Hit
TCCTTAGACAGAATCCAACTGAGGAACAAGCCGTAGACATATGCAAGGCA10.7575757575757576No Hit
CTCCTCGATTGCTTCATATAGCCCCCCAAGATCGAAGGTTCCAGGTTCCA10.7575757575757576No Hit
GGCCTTGTTTGCCAGCCCTCTACTGCACGAAGGCTGGCTTGTCTGCCTCC10.7575757575757576No Hit
CCGCAGCAGGTGTCATGGCCCCAGTACTCGTCTGTGTTCACCCCGCGGTG10.7575757575757576No Hit
GTTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTTGA10.7575757575757576No Hit
AGCTTTTTTTATCGCTATGGATTTGTGGCTAATTTTAGCATGGAGCTACC10.7575757575757576No Hit
GAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAGCTTT10.7575757575757576No Hit
ATCTAAAATATTTCAAGAACGAAAATCAGTAACAGTAACAACCCAGTTTT10.7575757575757576No Hit
CTAGCAAGCTGGGTCCAAAATGAATTCAATAAGGCATGTGAATTGACTGA10.7575757575757576No Hit
GGTTTACTTTCTTCTTTCCAATAGGGATTTAGTGTCCTTTCATAATACAT10.7575757575757576No Hit
GTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACC10.7575757575757576No Hit
ATGCAGCCGTTCGGCTCGAATCCATCTACATAGGCTCTAAAGTTTTCAAG10.7575757575757576No Hit
AGGACAAGTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGA10.7575757575757576No Hit
TCCAAGATCAAGATGAAATGGGGCATGGAAATGAGGCGCTGCCTTCTTCA10.7575757575757576No Hit
ATACATATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGAT10.7575757575757576No Hit
CTTAAACAGTATGACAGTGATGAGCCAGAGCCCAGATCTCTAGCAAGCTG10.7575757575757576No Hit
CCCATTAGCATCTCTCTTGGAAATGTTACACCGCACACAGATTGGACGAC10.7575757575757576No Hit
CTATAAGACAAGAAATGGCCAGTAGGAGTCTATGGGATTCCTTTCGTCAG10.7575757575757576No Hit
TTCCTGAAGTCTGCTTAAAATGGGAGCTAATGGATGATGATTATCGGGGA10.7575757575757576No Hit
TCGCAGGCCCTTCACGGCGGCAGGGTTCACCGACTCAGCCGTGAGACGGC10.7575757575757576No Hit
CTGAAAATCCTACATTTGATACTATACAAGCTCTCATCTTAAAGGCTGTA10.7575757575757576No Hit
GGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATATGAACTGCTAG10.7575757575757576No Hit
GATCCTCTCACATTCACAGTCAATGAGGAAAATTGCATCCTACTCTGTTC10.7575757575757576No Hit
CCCTAAGTGCCTGAACAATGAGAAGCAATTTTCTAGATTCAGCCGAAAAC10.7575757575757576No Hit
CCTAGTAAGGATGTGGACGTTGGTGGGCACATAAAATGATACAGCCAGGA10.7575757575757576No Hit
GCTTCCATATATCACCAGAAATAAACCCGAGGGGTTCCGAAACATCCTGA10.7575757575757576No Hit
CTCCAGTATTTGTCACTTTCTCATGAGTTCTCAAAAATAACTTTCTTAAT10.7575757575757576No Hit
CATCCATACCACCCACACAAGTTTTCCCACTGGTAGAGAATATGATGTCA10.7575757575757576No Hit
GAAAAACGGTGACAGCCAATGACAAACTCATCCTTCCCTACAGTCTCGGC10.7575757575757576No Hit
ATATGATGCCGTTGCAACTACACATTCCTGGATTCCCAAGAGGAATCGTT10.7575757575757576No Hit
ACACCACAAAAGTATCATTTCACAAATGTCACCTTCATTATAAATTCAAC10.7575757575757576No Hit
CTTTAGAGCCTATCTAGATGGATTCGACCCGAACGGCTGCATTCAGGGCA10.7575757575757576No Hit
TCAGAGGACAGTGGACTAAATTATGGCAAACTTCCACTTTAAGAAAAGAT10.7575757575757576No Hit
ATCGGAGAGTCACCCAGGGGAGTGGAGGAAGGCTCTATTGGGAAAGTGTG10.7575757575757576No Hit
GTGCAGCAGCACCTGGGCGTGGCTCAGCTGCCACTGCTTCTCCTTCAGGC10.7575757575757576No Hit
GAAATAAGACCCTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCG10.7575757575757576No Hit
ATGCCAGTTATCCCTGCACACACATGTGATTTCACTAGAATCAGGATAAC10.7575757575757576No Hit
GGTCCTACAGTGGGAATAATCAAATCTATGTCTTCCCTTCTGCGTCTGGC10.7575757575757576No Hit
CCTATTTCATCAAGTTCTATCCAGCTTGAAGCAGTCTATTCCCATGCGTT10.7575757575757576No Hit
TTCCAAGGCCGTCTGACTCGCCAAGCCAGAGTGGGGTCTGATGTCACCAG10.7575757575757576No Hit
GGGAAGGAGTAAGGAAGATGGATACCCACATTCTGGTGAAATTTATGACC10.7575757575757576No Hit
ATCAGCATGAGCAAAAAGAAGTCCTATATAAATAAGACAGGGACATTTGA10.7575757575757576No Hit
GTAAATACCTGTTGAATGGACTCACGATACAAGTTGCTGTTACGGAGAGG10.7575757575757576No Hit
CAGGAGAAACAATGCCCTTGCCTTCAGGGCCAGGGCATTTCATGATGTCA10.7575757575757576No Hit
GTGAGCGAGGACTGCAGCGTAGCCGCTTTGTCCAAAATGCCCTAAATGGG10.7575757575757576No Hit
ATATATTACCTAGAGAAAGCCAACAAAATAAAATCTGAGAAGACACACAT10.7575757575757576No Hit
AGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGTTGTATATGAG10.7575757575757576No Hit
GACTCAGGGCCATTGATCTCCCACATCATTGATGACGAATAAGTTATTGT10.7575757575757576No Hit
ATGTATATACAGCGCGCTGAAGAGGGCCATGCCGTCAAAAAAAGATCAAA10.7575757575757576No Hit
ATCTCTAACCCTTAAAAATCGGTCAATACTCACTACCACTCTCTCCGTGC10.7575757575757576No Hit
TCCCGGATGCTGGCAGGGGCGTGGGCCGCTCCCGGACCGCCGGGCTGAGG10.7575757575757576No Hit
GTGGTTGAGTGTTTGCAGATTTGAATTGCTGACTCTCCTGGGAAATTTGG10.7575757575757576No Hit
GCAGAAGTGTCCCACTGCAGGGCTACTGAATACATAATGAAGGGAGTGTA10.7575757575757576No Hit
CAACTACTTCAGTGCATGTCTGAGGAAGGAGTTGAACCAAGATGCATTAA10.7575757575757576No Hit
AGTAACAGTGATAAAGAACAACATGATAAACAATGACCTTGGACCTGCAA10.7575757575757576No Hit
CTCATGGACCAAGCACCGGCACTCTGGGGAACAAACAGGACACAAAAACT10.7575757575757576No Hit
GTGGCTGCCTGCTTCCTGATGCCGTTGCATCCCGTGGGAGGGGAGCTGGG10.7575757575757576No Hit
CAAATGATCTTCTCGTCTGAATTTGTGTGTCTCCCCTATTGCTCCTATAT10.7575757575757576No Hit
TTGTGGGATCTTGTGACCATTGAATTTTCACAATTTCCCAGTTCCTGATT10.7575757575757576No Hit
CTCCATGGAAGCGCAGAATCCTAGAAAGGTAAACAGAAGGTCATCATACA10.7575757575757576No Hit
GAACTGGGGAATTGAATCCATCGACAATGTGATGGGAATGATCGGAATAC10.7575757575757576No Hit
ACAAATATCTGGGCCTTGATGCAAAGACAAAGAACTGCTTTTTTTCTCCT10.7575757575757576No Hit
GGACAGCAAGAGAGGGAGACGCTCCTCGCTGAGCAGGGAGCCTGACGTAG10.7575757575757576No Hit
GAGAGAGGCAAGTTAAAAAGAAGGGCTATCGCAACACCTGGGATGCAGAT10.7575757575757576No Hit
ATTAGTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCC10.7575757575757576No Hit
CTCCAATACTCATGTCAGCTGATTCATTTACTCCAGACACTCCAAAGCTG10.7575757575757576No Hit
CTCATATCCATGGGGTGCTTGATGATGTCACAGTAGTCGTGCATACACAG10.7575757575757576No Hit
GAACTTAGAGATTCAGGGCTTTTGTTTTCGTATTGGCAATTTCAATTTAT10.7575757575757576No Hit
AGTACATGAAGGGTATGAAGAATTCACAATGGTTGGGAGAAGAGCAACAG10.7575757575757576No Hit
CTAGAGATCAGGGCTCTGGCTCATAGCTGTCCTACTGTTTAATGTCTCCA10.7575757575757576No Hit
CGCTGAGAGGGATAAGAGTCAGCAAAATGGGAGTAGATGAATACTCCCGC10.7575757575757576No Hit
CCTTTCGTCAGTACGAAAGAGGCGAAGAGACAATTGAAGAAAAATTTGAG10.7575757575757576No Hit
TCCTTACTCCTCCAATCTGTGTGCTGTGGCACATTTCCAAGAGAGATGCT10.7575757575757576No Hit
CCTGACAGCATACCAAGGCCTCAATTATTTCCTCAGCAATTGACTTCAAG10.7575757575757576No Hit
AAGTAAGATATGCCAGTTGCGAAAAGAAATACTTTGTGATTCTACTTAAC10.7575757575757576No Hit
GGGTCTCACTCTGCATCTATTAGAATGGCTGGAATAAAATTTATCGACAC10.7575757575757576No Hit
ATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCT10.7575757575757576No Hit
GTCATACTGTTTAAGGTCTCCAACATCTTTGCAGTCATCAAAGTCTACTT10.7575757575757576No Hit
TGTATATACAGCTCGCTGAAGAGGTCCATTACCGCAAAAAAGCTCAAATG10.7575757575757576No Hit
CACTGCATTAGGTCTCTTTACTGAGGGGAATGGGAGGAGTAGATCCCGCC10.7575757575757576No Hit
GGAACAAACAGGAAACAAAAACTCGAAATTAGTACAGATGATCACAGCAG10.7575757575757576No Hit
GTATTCATCTACTCCCATTTTGCTGACTCTTATCCCTCTCAGCGACATCT10.7575757575757576No Hit
TTCTACAGGACCAGCAAGTTAGTGGGAATCAACATGAGCAAAAAGAAGTC10.7575757575757576No Hit
AAGATGCAGAGAGAGGCAAGTTAAAAAGAAGGGCTATCGCAACACCTGGG10.7575757575757576No Hit
ATTCGACAATAATTGATGGCCATCCGAATTCTTTAGGTCGCTGACTGGCT10.7575757575757576No Hit
AAATTAGTGGTGTCCCAAGAGACAGGTTAACAAATCTGTGACAGTTTTTA10.7575757575757576No Hit
TATCATCAGAGTTCACAAATACATTGAAATTGGCTTTTTATCGGTTTATG10.7575757575757576No Hit
CTCCACCACAGATGTGCCTTCATCTGGCTCTTCAGTCAATCCACCTGCAT10.7575757575757576No Hit
GGTGATGCAATGTTAAACATACAAAATCTTCTGTTGAGTATTTTTGCCAA10.7575757575757576No Hit
CTTGAATGGAATGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATT10.7575757575757576No Hit
GTATTTTTCCCATTTGTGTGGCTCCAGTCTCGGGTCAGTGAGTGAGAACT10.7575757575757576No Hit
CTTTGACAGAAGACTCGGCCTCAATCATGCTCTCAATCTGCTGAAGAGAC10.7575757575757576No Hit
CTTTCAGCTGATCCCAATGATAAGCAAATGTAGGACCAAAGAAGGAAGAC10.7575757575757576No Hit
TGTATCAGCAGAGTTCACAAATACATTGAAAGTGGCTTTTTCTCGGTTTA10.7575757575757576No Hit
GGCCAACACCATAGAAGTCTTTTGATGGAAAGGCCTAACAGCTATTGAGT10.7575757575757576No Hit
ACTCCAAACAAGGAAAGAAAAGAGGTTAAAAAAAGATGTGACTTGGAGAG10.7575757575757576No Hit
GTGATGGATACCCCAGATGGGGCCCGACCTGACCATCCTGTCCTGCTCGA10.7575757575757576No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers