FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_E05_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_E05_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATATACAACAGGATGTGAACAGTGACCACAGAATCTGCTTATGGTCTAG14.761904761904762No Hit
GTTTCATGTATTCGGATTTCCATTTCATCGACGAACGGGGTGAATCAATA14.761904761904762No Hit
TTACATCATTCTTATAACTTCTGTTCGAATGTCGGATGTCCGTCCTTCAT14.761904761904762No Hit
CCATAGCACCAGGCCCGCGAGACACTCCTGAGCCCCCGTCACTAGGTCAC14.761904761904762No Hit
CCACTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGA14.761904761904762No Hit
ATACTCACTATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGA14.761904761904762No Hit
GGGGCTTTCCAGCTCTAGCAATGAACTACCCGGCCCTGTTGCAGTTTTGT14.761904761904762No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA14.761904761904762No Hit
GGTTGGAGGTTGCCCGTTAGCACTTCTTCTTATTTCTTGACTGATGATCC14.761904761904762No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG14.761904761904762No Hit
GTATATGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATTTG14.761904761904762No Hit
GGTCCCTTGAGTAGGGGGAGTTTGTTATGCCCCTGGATAAAGAAAAGGCC14.761904761904762No Hit
GAGTTAAATTTCACTATGGATGTGAATTCCTCTAATGATAGGAGATACCC14.761904761904762No Hit
ACTCAGCACCGTCTGGCCAAGACCAACCCACAGTGTCACTGTTTACACCA14.761904761904762No Hit
AATGATGACACTGAGCTCAATTGCTCTCTTAGCTCCTCATAATCGATGAA14.761904761904762No Hit
GGCCACTTGTTACCAGATTGCTGCTTAAACTCAGATGGCGCACAGACCGC14.761904761904762No Hit
TAACTTCTGTTCGCATGTCGGATGTCCGTCGTTCATTGTTCCAGATGAAT14.761904761904762No Hit
GTGGAGTGGAGAGCCAGAGGCTGCTGCCTGTGGTGAAGGCTCATCAGGGA14.761904761904762No Hit
CGGTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCAT14.761904761904762No Hit
CCCATAATGTTCTCAAACAAAATGGCAAGACTAGGGAAAGGGTACATGTT14.761904761904762No Hit
AACAATATACAGCTCTGACATTAAATACCATGACCAAAGAAGCAGAGACA14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)