FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_D09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_D09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATATGTGTCTCCACAACTTGAGGGGTTTTCGGCTGAATCTAGAAAATA10.8264462809917356No Hit
GTCTATGGGATTCCTTTCGTCAGACCGAAAGAGGCGAAGAGACAATTGAA10.8264462809917356No Hit
GGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATG10.8264462809917356No Hit
ATACTGAATCTTGGACAAAAGAAATACACCAAGACAATATACTGGTGGGA10.8264462809917356No Hit
AACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCGA10.8264462809917356No Hit
ATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGAGCCTAACATA10.8264462809917356No Hit
ATGGAAGACTTTGTGCGACAATGCTTCAATCCAATGATCGTCGAGCTTGC10.8264462809917356No Hit
GTGCAGGACCTTACTGGCAAAATCTGTATTCAACAGTCTATATGCGTCTC10.8264462809917356No Hit
TCTCTATGTAATATATTTGCACTTCGAAACGTTCAACAGCAATGTCCAGG10.8264462809917356No Hit
ATCATAACCCACAATGAACATTCAGGCAGTGGTGGCGGTCTGCCTTTCCT10.8264462809917356No Hit
GAATTGACTGATTCAAGCTGGATAGAACTTTATGAAATAGGAGAAGATGT10.8264462809917356No Hit
ATCACATCCTGTGCCTCCTTGGCACTGAGATCTGCATGGCCAGGGTTTGT10.8264462809917356No Hit
CTGTCCCGGCTTCTGGTTGCCTTAGGGACCAGAGCCTGAAATGGTTCAAA10.8264462809917356No Hit
CCTATATGAACTGCTAGGGAAAAATTTGTCGTATAGTTTGCACGACTTCT10.8264462809917356No Hit
TCCCAATGATATTTGCTGCAATGACGAGAGGAACCCTTGAATCGCTGCAT10.8264462809917356No Hit
CAGTAATACACAATATCAGGTGCAAGATAACAATGATATTTGCTGAAATG10.8264462809917356No Hit
ATGGAAAACTAGGTTGCAAAATGGAAGGAAGCAGGCTGAGACAATGGAAA10.8264462809917356No Hit
GATGATGACTAATTCACAAGACAAATATATTTCTTTCACAATCAATGGGG10.8264462809917356No Hit
AGCAGATTGAGAGCATGATTGAGGCCGAGTCTTCTGTCAAAGAGAAAGAC10.8264462809917356No Hit
GCCTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGT10.8264462809917356No Hit
GAGTTGAACACCGCTGCATTAAGCACACCCCAGTGAGCATTAATCCGGCA10.8264462809917356No Hit
CCCTTCATTATGTATTCAGTAGCCCTGCAGTGGGACACTTCTGCTGTAAA10.8264462809917356No Hit
GTAGATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGCCGC10.8264462809917356No Hit
CTACAGGACCTGCAAGTTAGTGGGAATCAACATGAGCAAAAAGAAGTCCT10.8264462809917356No Hit
GTGTAGTTGCAACGGCATCATATTCCATGCTTTTGGCTGGACCATGGGCT10.8264462809917356No Hit
TCTCACAGGACGATTGCATGATCAAGGCAGTTAGGGGCGATCTGAACTTT10.8264462809917356No Hit
TCCTTATTTTAACTTGATTTCTGAAGTGGACAGGGCCGAAGGTACCATGT10.8264462809917356No Hit
ATTCAGAAGCCCTGCAGTGGTTCACTTCTGCTCTAATTTAGTTCCTCGTC10.8264462809917356No Hit
GCAGGAGGAGGACCAGGTGCAGGAGCAGGTGCAGGAGCAGTGGCAGCAGC10.8264462809917356No Hit
ATTCCCCTCCTTTCTCATATAAACTACCATTTGGGCTCCCTGCTCTGCCT10.8264462809917356No Hit
GGTCAACATCATCATTTCTCTCTTCTCCTCCTGGAGTGTACATCTCCTAC10.8264462809917356No Hit
CATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTC10.8264462809917356No Hit
ATTCCGTATATTGTATAAGTTTGGTCCTCCATCTGATACTAATAGCCCTA10.8264462809917356No Hit
CAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAAC10.8264462809917356No Hit
CATATATTTTAATAATAATGGGTAAGCAGAGTGTGTTCACACTCTTCAAG10.8264462809917356No Hit
GCACTCATTCTGAGGGGATCAGTTGCAAATAAATCCTGCCTGCCTGCTTG10.8264462809917356No Hit
GTTCACCACATCAGTATCATTTCTCAAATGAGACCTTCCTTTTATAATGA10.8264462809917356No Hit
CCAGTATATTGTCTGGGTGTATTTCTTTTGTCCAAGCTTCAGTATCGAGA10.8264462809917356No Hit
GTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTGATTACTTAATTTGAGA10.8264462809917356No Hit
AAACAGAACACCCAAATACTCAGAAAAGGGAAAGTGGAAGACACACACAG10.8264462809917356No Hit
CCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTT10.8264462809917356No Hit
GCGATAGGCCAAGTGTCGAGGCCCATGTTCCAATATGTGTGACCCAATGG10.8264462809917356No Hit
ATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATT10.8264462809917356No Hit
ATGCGCAAGCTTGCCGCCCAAAGTCTCCCACAGAACTTACCCCGCCTTGA10.8264462809917356No Hit
CATCCCGCATTTGCTGGAACAGTGTCCTTACGAATCCACTGTACCGGCTT10.8264462809917356No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT10.8264462809917356No Hit
CCACTTACATCAATGGATAGGTCATCCAGACAGAAAATCAATAAGGAAAC10.8264462809917356No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC10.8264462809917356No Hit
GTATAAGTTTGGTGGGGGGGGGGGGGGGTGTGTGGCGGGGGGGGGGGGGG10.8264462809917356No Hit
CATCTGGATGTATAAAAAAATGCTCATGATCTCAACAGAGGAATGCTCTT10.8264462809917356No Hit
GATCTCAGAGCCAAGGAGGCACAGGATCTGATTATGGAAGTTGTTTTCCC10.8264462809917356No Hit
GTCTCAATTTTGTGCTTTTTACATATTTTTGACATTTTCCAATTGTGATC10.8264462809917356No Hit
CCCTAGAACATACCCTTCCAGGTAGTAATGAGGCATTTGCTGCACTGAAG10.8264462809917356No Hit
ACACAGTATTTTTCCCATTTGTGTGGCTCCAGTCTCGGGTCAGTGAGTGA10.8264462809917356No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTC10.8264462809917356No Hit
CACAAATCCATAGCGATAAAAAAAGCTTGTGAATTCAAATGTTCCTGTCT10.8264462809917356No Hit
ATAGTCATGTCAGCTGATTCATTTAGTCCAGAAACTCCAAAGCTCGGTAG10.8264462809917356No Hit
ATATAAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTAT10.8264462809917356No Hit
GTCCTATATAAATAAGACAGGGACAGTTGAATTCACAAGCTTTTTTTATC10.8264462809917356No Hit
GGATTATATTCTCCCTGGGTTCATTAAAAGAAATCCCTTAAGCTAGTTTT10.8264462809917356No Hit
ATGTGGTGAACTTTGTAAGTATGGAGTTCTCACTCACTGACCCGAGACTG10.8264462809917356No Hit
GGAGTGACCAGGACCAGCAGCTGGCGAGTCACTGCTGATGGCAAAGGAGA10.8264462809917356No Hit
ATCTACATAGGCTCTAAAGTTTTCAAGGCTGGGGAAGTTCGGTGGGAGAC10.8264462809917356No Hit
GTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATTCTGTTTTCATGC10.8264462809917356No Hit
ATTGAATACTGGAGAATTGCCTCTTACCAGTATACTAAACCCTGATCCTC10.8264462809917356No Hit
CTCCCTTCATTATGTATTCAGTAGCCCTGCAGTGGGACACTTCTGCTGTA10.8264462809917356No Hit
AAATAAGGCCTCTTCTAATAGATGGCACAGCATCACTGAGTCCTGGGATG10.8264462809917356No Hit
GACGAGCAGTCAATTGCTGAGGCAATAATTGTGGCCATGGTATTCTCACA10.8264462809917356No Hit
AAACATAATGGACTCCAACACCATCTCAAGCTTTCAGGTAGACTGTTTCC10.8264462809917356No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.8264462809917356No Hit
TTGTTATACAACAAAATGGAATTTGAACCATTTCAGTCTCTTGTCCCTAA10.8264462809917356No Hit
AGTAGAAGCAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.8264462809917356No Hit
AGGTTGAGACATGGTACCTTCGGCCGGGGCCACTTCAGAAATAAAGTTAA10.8264462809917356No Hit
GTATGCTAGAGTCCCGGTTTGGTTTTATTACCACCACAACGTCCCCTGGG10.8264462809917356No Hit
GGCCCGGCACGTTCAGTGCATGTGTCACCAAGGGCTTGAACCTAGTTGCA10.8264462809917356No Hit
CTCCTAGCTAAAGTTTCAACAAAGTATACGAAACCTCTAATCTGCATCCC10.8264462809917356No Hit
GGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGA10.8264462809917356No Hit
TTCTTGTCTTATAGTGAAAAGCCTAGTTTTGATTCTTGCCCTGCTCTCAT10.8264462809917356No Hit
ATCATGTTGTTCTTTATCACTGTTACTCCAATACTCATGTCAGCTGATTC10.8264462809917356No Hit
GATTCGAGCCGAACGGCTGCATTGAGGGCAAGCTTTCCCAAATGTCAAAA10.8264462809917356No Hit
ATAGAGAGGATGGTGCTTTCTGCTTTTGATGAGAGAAGAAATAAATACCT10.8264462809917356No Hit
GGTTGCTAATCAGACTAGGCAGATGGAACATGCAATGAGAACTATTCGGA10.8264462809917356No Hit
TGTATATACAGCTCGCTGAAGAGGTCCATGACCTCAAAAAAGATCAAATG10.8264462809917356No Hit
AGGCCAAGTGTCGAGGCCCATGTTCCTATATGTGAGAACCAATGGAACCT10.8264462809917356No Hit
ATTCCACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATG10.8264462809917356No Hit
ATTGAACATATCGCAAGCATGAGGAGGAACTATTTTACAGCAGAAGTGTC10.8264462809917356No Hit
GCAGTGGAGAGGCAAAGGTTGATTAATCAATGGCCAGAGCTGCCATGAAG10.8264462809917356No Hit
GTCATACACCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCA10.8264462809917356No Hit
CACGCTTGTGAATCATAGTGGGGTTGCCCAGAGGAGGCCCTTAAGGGTCA10.8264462809917356No Hit
CTCCCTTCATTATGTATTAAGTAGCCCTGCAGTGGGCCACTTCTGCTGTA10.8264462809917356No Hit
TGCTCAGGATGATTCTGAACCACTCGGGTTGATTTCTGGTGATATATGTA10.8264462809917356No Hit
CTCTACGTGCTGGAGTATTCATCTACTCCCAGTTTGCTGACTCTTATCCC10.8264462809917356No Hit
AGGGGTTTTCGGCTGAATCTAGAAAATTGCTTCTCATTGTTCAGGCACTT10.8264462809917356No Hit
CTATATGTGTATCTGTAGTCTTTGATGAAAAATTGAATAGCCATCTGGGC10.8264462809917356No Hit
GATTAGTGGATTGGTGGTAGTAGCCATCTGTCTGTGAGACCGATGCTGTG10.8264462809917356No Hit
GGGGGGTCTGGGGGCGGGGGGTGATGTTGCGCAGTCTGCGGTTCCGGCTC10.8264462809917356No Hit
GGTCAGGCAGGCTGGGAGAATGCTGGCTCAACGGAAAGGCTGGAGCTCAC10.8264462809917356No Hit
CCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATATGAACTG10.8264462809917356No Hit
GAATAAGTTATTGTCAACTTCTCAGTTCCTTGCGTTTCACTGAATTCTTC10.8264462809917356No Hit
TTCAGATCCTACACTTTTGCTTAAGATTATAACTATAAGATCACTCTACT10.8264462809917356No Hit
GTCATACTGTTTAAGGTCTCCAACATCTTTGCAGTCATCAAAGTCTACTT10.8264462809917356No Hit
GCGTTTGGCTGGACCATGGGCTGGCATTACCACAGCAGTGTTTACAGAAT10.8264462809917356No Hit
ATGTTAGGCTCTTTCCAGCCAAAGAATGTCTTCATGCATTTGATTGCATC10.8264462809917356No Hit
GGTGGTAGTAGCCATCTGTCTGTGAGACCGATGCTGTGAATCAGCAATCT10.8264462809917356No Hit
CAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGGTGCAT10.8264462809917356No Hit
CTTTGTAATCATACAAATCAGGAAGAAATTTAGGCTTCTCTACCCCTGTT10.8264462809917356No Hit
GCACTGAGATCTGCATGGCCAGGGTGTGTATCAACTCGCCTCCTGAGTTT10.8264462809917356No Hit
AGCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGAAAGGTA10.8264462809917356No Hit
GCTTTCTTCTCTTTTGTTATTGCCAGCTGTGCCTCTGCTGGCAGTATTCT10.8264462809917356No Hit
GGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTG10.8264462809917356No Hit
ACATCTCCGTGCTTGGGGTCATGTCGTGCAGTATTCCGATCATTCACATC10.8264462809917356No Hit
CTACAGATACACATATAGGTGCCATAGGGGAGACACACAAATTCAGACGA10.8264462809917356No Hit
GCTGCACAGGATGCATTGAGCAAGGCCGTATTTATGTACACTCCCTTCAT10.8264462809917356No Hit
CCACTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGA10.8264462809917356No Hit
CTGGGGGCCCAGACTGTTCAAGCTTTTCGCAAATGCTCCTAGCTAAAGTT10.8264462809917356No Hit
TCCCACCAGTATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTAT10.8264462809917356No Hit
TCCCAATAGAGCCTTCCTCCACTCCCCTGGGTGACTCTCCGATTGGCCAT10.8264462809917356No Hit
GATCCCCTCAGAATGAGTGCTGACCGTGCCAGGAAAATGAGGTCTTCAAT10.8264462809917356No Hit
GAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGCGA10.8264462809917356No Hit
CTTCTAGAGGGCCCTGCTGGGGATCTGGGGCAATCTTGGAGAGGAAAGCA10.8264462809917356No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC10.8264462809917356No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)