FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_D05_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_D05_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATAGC14.545454545454546No Hit
GGTTTGCCACCACCTCCTGCATCTTGGGCCGGCTGATGTCCAGGAAACTC14.545454545454546No Hit
CTTCAATATAAACACTGCCTGTTCCGCCGGCGACTGGGAGACACCTTGGT14.545454545454546No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG14.545454545454546No Hit
CTTCAAGGAAATACATAGCCTCTAGAACACAGTCTGTTTGTGCATACCCA14.545454545454546No Hit
TCTTTCAGTTTTGGTGGGTTCACTTTCAAAAGGACAAGCGGATCATCAGT14.545454545454546No Hit
TAACAAAAGAGAAGAAAGAAGAGCTCCAGGATTGTAAAATTGCTCCCTTG14.545454545454546No Hit
ATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGAGCCTA14.545454545454546No Hit
GGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGC14.545454545454546No Hit
GCATCCGACGTTCGAACGTGCCAAATAACACCAATTCAAATACTAGTCAC14.545454545454546No Hit
TAGTGAAGGTCGCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTA14.545454545454546No Hit
AATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGCCGCAT14.545454545454546No Hit
GCCGGTTACGAGTAACCGCAAGGCTCCTCCGCTCCGATTCACAGTCATTG14.545454545454546No Hit
CTTCATTAAGTATTCAGTAGCCCTGCTGTGGGACAGTTCTGCTGTAAAAT14.545454545454546No Hit
GTAGTTCAGGTATAACATTATCATAAAATTTTAGCCAAGCGCATATCTTT14.545454545454546No Hit
CTTCTTTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGG14.545454545454546No Hit
GTCCTACATTGTGGAAACACCTAGTTCAGACAATGGAACGTGTTACCCAG14.545454545454546No Hit
TTGGAGGAGTAAGGATGGTGGACATCCTTAGACAGAATCCAACTGAGGAA14.545454545454546No Hit
GAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATCGG14.545454545454546No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA14.545454545454546No Hit
GATATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCT14.545454545454546No Hit
ACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTT14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)