FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_B09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_B09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTATGTTGAGCCCAACAGCTTCTTTCACAAACTACTTTTTAAAAGTCTC10.684931506849315No Hit
GTCCCGAGGGGGAGGGAATACCACTATATGATGCAATCAAATGCATGATG10.684931506849315No Hit
CTTATAGTTTGCTTTCCACTTATCTCATTATCTTAAGGTGCATATTAAAA10.684931506849315No Hit
GTATTATTTTTAAGGCATTAAAGCATCAAACATCATTGTCATACCAAACT10.684931506849315No Hit
GTTGTGGCTATGGCTTTCCTTGAAGAAGCCCACGCAGGAGTATTTGTGAA10.684931506849315No Hit
CCATTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCG10.684931506849315No Hit
GTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTCCCAAGAC10.684931506849315No Hit
CCTACCCCGCCCTGCACTCCTCACGGCGGCGACCGCTCTGGAAAAACCCG10.684931506849315No Hit
GTCACTGTCCCATTGGACTGGCCACAGACATGGGCCAGGCTTACGTTCCT10.684931506849315No Hit
ATTTCGAAAAGGTCGAAAGGTTGAAACATGGTACCTTCGGCCCTGTCCAC10.684931506849315No Hit
TATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTGT10.684931506849315No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCC10.684931506849315No Hit
CCACTAATCAGGCATGAAAACAGAATGGTGCTGGCTAGCACTACGGCAAA10.684931506849315No Hit
GATATCAAGTTGCATTCGCTGTCCTTTAGATAAGCTTTCCCATCTATAAG10.684931506849315No Hit
ATATAGAGGTATGCAACAAAATCCTCAATTCTGTAATATAACCCAGATAG10.684931506849315No Hit
AATAAACACTAATGCCTCTTTCTTTGGATTTTTTTTTTTAATGGGTATAA10.684931506849315No Hit
GAAAAAATCTGGGTGCCTTGTCTTGTGAAACCCTGCTGCAAGCACAGCCC10.684931506849315No Hit
TCTCTACCCCTGTTGTGTTACATATACTGTTCACCACTGTCCAGGCCATG10.684931506849315No Hit
GCCTTTGCCGTAGTGCTAGCCAGCACCATTCTGTTTTCATGCCTGATTAG10.684931506849315No Hit
TCTTTTATCTTTTGAGGTCAAGTTGCATTAGAAATAACTCTCTCTGGTGA10.684931506849315No Hit
ATGCCACATATCAGAGAACAAGAGCGCTTGTTCGCACCGGAATGGATCCC10.684931506849315No Hit
GACTAACACTCAGGAGATCCTCAGCGGTCGTTCCAACCACAGACGTGTGC10.684931506849315No Hit
GTATATTGTCTTCGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTC10.684931506849315No Hit
GTACTTGTTGTTGGGCCATTCATATTCCACCATGTTACGGCCAGAGGTGA10.684931506849315No Hit
GCCGTAGACATATGCAAGGCAGCAATAGGGTTGAGGATTAGCTCATCTTT10.684931506849315No Hit
TGATTGCATCATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTAA10.684931506849315No Hit
CCTGTAAAATGAGAATGAATTATCATGATAGTATATAGTCAATAGGTTTA10.684931506849315No Hit
GTAGAAACAAGGGTGTTGTTTATCATTAAATAAGCTGAAACGAGAAAGCT10.684931506849315No Hit
TGAAGAGCCATCTGGGCCGTTGCAGGTCCAAGGTCATTGTTTATGATGGT10.684931506849315No Hit
TCTTGAAGAGAGTACCTTCTCACACCTGCGTTCTTTTATTGAGAGATACT10.684931506849315No Hit
CAATTGAAGTGGGCACTCGGTGAAAATATGGCACCAGAAAAAGTAGACTT10.684931506849315No Hit
TCAATACTTAATTTCAGAGCATCAATCAGCAGGAACATTGACCGCTGATG10.684931506849315No Hit
AACATGACCTGAGCTGAAGGCAGAGGCTCTAACCCACTGAGCCACACAGG10.684931506849315No Hit
TTATGGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG10.684931506849315No Hit
GCTAGAAAGACAGCTCTGCTTTCAGGAAGGTTGGGGAACATATGCCCTGG10.684931506849315No Hit
TAACTTCTGTTCGCATGTCGGATGTCCGTCCTTCATTGTTCCAGCTGAAT10.684931506849315No Hit
ATGTTATGAGAAGTGACTGTCATGAGATCACAGAACACAATCCAGTCCCA10.684931506849315No Hit
AATGCGGGATGTGCTTGGGACATTTGACACTGTCCAAATAATAAAACTTC10.684931506849315No Hit
ACCGTACTTAGCATGTTGAACATGCCCATCATCATCCCAGGACTCAGTGA10.684931506849315No Hit
CAACACTAAGTGGAATTAAAATCAAAATCCTCGAATCTTACTGGCGATGA10.684931506849315No Hit
ATCAGCACCCACAGAACCCAGTGGCAGGGTCCCAAGGACTCACTACTGGC10.684931506849315No Hit
CAATAAAGAAACGTATTTATGTCTTCACGACAGGAACAATATGGAGCAAA10.684931506849315No Hit
GAAACAAGGGTATTTTTCCTCAACTGTCATACTCCTCTGCATTGTCTCCG10.684931506849315No Hit
ATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTTGTAAAGGATG10.684931506849315No Hit
ATACCATGGCCACAATTATTGCCTCAGCAATTGACTGCTCGTCTCTCCCG10.684931506849315No Hit
CCATCTATCCAGCGTACTAGTTCCAAACATACCTAGGAGGCCTGTGTGTC10.684931506849315No Hit
ATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCATAGTGA10.684931506849315No Hit
GTGGTGTCTTGGTGTATGGTAAGCCAGATGGAACTTACTGATCAATAAAT10.684931506849315No Hit
ACTGAACCCCATGCACCAACTCTTGAGGCATTTCCAAAAAGATGCAAAAG10.684931506849315No Hit
ACCCATAATGTTCTCAAACAAAATGGCAAGACTAGGGAAAGGGTACATGT10.684931506849315No Hit
GCCATCTAGGATCTGACCGCTTAATGTGTCAAGATTCTAAATTTATCATT10.684931506849315No Hit
GTATACGAAACCTCTAATCTGCATCCCAGGTGTTGCGATAGCCCTTCTTT10.684931506849315No Hit
ATACAGAATATATTACCCACTAAGCTTAGCCTTTATTTCAGAGCATAAAA10.684931506849315No Hit
GTATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTG10.684931506849315No Hit
ATATAAAATTCCTATAATTTTTACTAAATGAACATAATTTTTAAAAGTCC10.684931506849315No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT10.684931506849315No Hit
ATCTCTAGCAAGCTGGGTCCAAAATGAATTCAATAAGGCATGTGAATTGA10.684931506849315No Hit
GTCATACTCCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCA10.684931506849315No Hit
AAGCCCTTCTGTCCCCAAGTGCCCATCAGCCTGGTTGGGAACAAGAAGGA10.684931506849315No Hit
CTCCACAGCAAGCTCATGGTCCTACATTGTGGAAACACCTAGTTCAGACA10.684931506849315No Hit
GGTAATATATGTGGACTTCCCTCCGTGTTACTCCAATTTCAATGAACCGG10.684931506849315No Hit
GATAAGTGTTGACTAGCACTGACTCAGTGCCATTGATCTCACACATCATT10.684931506849315No Hit
ATCTAAAGACTTCTATGGTGTTGGCCAATGCAGTTGCTGCCGGTTGATTT10.684931506849315No Hit
ATTAGTATCAGATGGAGGACCAAACTTATACAATATACGGAATCTTCACA10.684931506849315No Hit
GGGGAGGGAATACCACTATATGATGCAATCAAATGCATGAAGACATTCTT10.684931506849315No Hit
CCAAGATAAAGATGAAATGGGGCATGGAAATGAGGCGCTGCCGTCTGAAG10.684931506849315No Hit
CGCATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTT10.684931506849315No Hit
GGTAGGCAGGATAAGACCCAGAGATGGTAAGGAATTTGTCCAAGGTCACA10.684931506849315No Hit
GAATTGAATCCATCGACAATGTGATGGGAATGATCGGAATACTGCCCGCC10.684931506849315No Hit
CCTTACTCCTCCAATCTGTGTGCTGTGGCACATTTCCAAGAGAGATGCTA10.684931506849315No Hit
AATCAAAACTAGGCTTTTCACTATAAGACAAGAAATGGCCAGTAGGAGTC10.684931506849315No Hit
GTGTAATTCTAAGTCCAAGCTATGGCCTTTCAGGCTTATTAACATCCAAA10.684931506849315No Hit
GGCCAACACCATAGAAGTCTTTAGCTAGAATGGCATAACAGCTAATGAGA10.684931506849315No Hit
ACCTTTGATTGGGTTTGATCCCACAGCTTCTTTAACTCAAATGATCTTCT10.684931506849315No Hit
GTCTATGGGATTCCTTTCGTCAGTCCGAAAGCGGCGAAGAGACAATTGAA10.684931506849315No Hit
ACATGAGAAAGGCATAAATCCCAATTACCTCATGGCTTGGAAGCAGGTGC10.684931506849315No Hit
GGCCAAGGGATGCCAGTCTTCCGTTGACAAGTGATATAAAAGTCATATAA10.684931506849315No Hit
CATGTCAGCTGATTCATTTACGCAAGCCACTAAACAGCGGGTAATCTCCA10.684931506849315No Hit
CCCTCATGGTTTGGTGCATTCACTATGAGAGCAAAATCGTCGGATGATTG10.684931506849315No Hit
CATACACACAAGCAGGCAGGCAGGATTTATGTGCAACTGATCACCTCAGA10.684931506849315No Hit
ACTGTCATACTCCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTAC10.684931506849315No Hit
ATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTC10.684931506849315No Hit
CAATGCAGCCGTTCGGCTCGAATCCATCTACATAGGCTCTAAAGTTTTCA10.684931506849315No Hit
CTACAGGACATTGAAAATGAAGAGAAGATCCCAAGGACAAAGCACATGAA10.684931506849315No Hit
GCGGAAAAGGAAATGAAAGAATATGGGGAAGATCCGAAAATCGAAGCTAA10.684931506849315No Hit
TGAGAATAGAACGATTCCTCTTGGGAATCCAGGAATGTGTAGTTGCAACG10.684931506849315No Hit
CCTCTTGGAATCACTTTCTTTCCTCTTATGAAACTTGATACTCTTAAATC10.684931506849315No Hit
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA10.684931506849315No Hit
GGCTATAGTGAGTACTGCATGCAGACCAGGCACCGTGCCAATTGGGATCT10.684931506849315No Hit
TTCAAGCCCTCAGCTCTAGTGCCACACTACCCACTCCGCTAGAGGGATCA10.684931506849315No Hit
GGAGAGAAGATGGAGGGTAAGGGTCATGAACCTAGGATTATCAGCTGTCC10.684931506849315No Hit
GGTTAAGAGAGTGGCCTCTTACTGTTTGCTTTTTGAGTCCTGCACATGTA10.684931506849315No Hit
ATTCATGCCTTGAAACAATGGAAGTTGTTCAACAAACAAGGGTAGATAAA10.684931506849315No Hit
GCAGTATAAAGTCCCGCCCAAAACTGTACCACAGAAAGAAAGCTGGGTAA10.684931506849315No Hit
TCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCGTC10.684931506849315No Hit
GTATAAGTTTGGTCCTCCATCTGATACTAATCGGCCTACCTTTGATTGGG10.684931506849315No Hit
CTCCCCTAGGTCCCTGTCACTCATACAGGGATGTATTCAGAAGTCGGAAC10.684931506849315No Hit
GCATGTGAGGGGGGCTGGGGTCATAGGCCAGAGGTATCAACATGACAGTT10.684931506849315No Hit
GGTGCATGGGGTTCAGTCGCTGGTTTGCCCTATTGACAAAGTTCAGCTCG10.684931506849315No Hit
CAGGTGCTAGCAGAGCTACAGGACATTGAAAATGAAGAGAACATCACAAG10.684931506849315No Hit
AACTATAAGTGTGACACAGATAGAAGACTGGTTGTTTGGTGTTGGAAAAC10.684931506849315No Hit
CTTTGCTTCTGTCCCAGCAAGGACGTCATACACTGGGCCCTCTGGCATCC10.684931506849315No Hit
TCTTTTTAACTTGCCTCTCTCTGCATCTTTGGTCATCGTATTTAATGTCA10.684931506849315No Hit
GGACCTGGGGTTACCGACGTCCCCCAAGGCAGGTCCAGGTGGACCAGGGA10.684931506849315No Hit
GGGTCAGGGCACAGAGGGCCGGTGTCCTTGTGCCCAACGTTTGATTTCTT10.684931506849315No Hit
GGTTAGAGGTATATAGTTAGGAATGTCTCTTTCTTGGAACCCGAGTGCCC10.684931506849315No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT10.684931506849315No Hit
GTGCCAAGGAGGCACAGGATGTGATTATGGAAGTTGTTTTCCCAAATGAA10.684931506849315No Hit
CTCTAGTTCCCAGATATCCAGGCGCCTGGACAGAATGAGAGGGCTTGCAT10.684931506849315No Hit
GTACACTCCAGGAGGAGAAGTGAGAAATGATGCTGTTGACAATAGTGTGA10.684931506849315No Hit
AGTCCCAATAGTTCTCATTGCATGTAACATCTGCCTAGTCTGATTAGCAA10.684931506849315No Hit
GTTATTCCCCTAGCCCTGAATGAACATTTGAGCAAGTTCATACCTTTTCT10.684931506849315No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG10.684931506849315No Hit
ATTCTCTGTCGCTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTTA10.684931506849315No Hit
GTATTGCAATCGTGGACTGGTGTATCTGAAATGATAATACCACATCCAGC10.684931506849315No Hit
GGGAAAAATACTGTGTTATTGAAATAGGAGACATGCTCTTGAGGACTGCG10.684931506849315No Hit
GTGCAGCCATGAGTGCCGAGGGGAAGGTGACAGGGCAGAACCAGGACCAA10.684931506849315No Hit
GGCAAGAATACTGACATCAGAGTCACAGCTGGCAATAACAAAAGAGAAGA10.684931506849315No Hit
GGGGCGTACAGAGTTTGCCAGTACGGTAGTGCGCCTTTTCGCTATATCGC10.684931506849315No Hit
CTTCTATGGTGTTGGCCAATGCAGTTGCTGCCGGTTGATTTCTGTTTAAT10.684931506849315No Hit
CCCTAAGGCAACCAGAAGCCGGTACAGTGGATTCGTAAGGACACTGTTCC10.684931506849315No Hit
ACTAAGTGCTATGATAATTATCTGCTAAGACCTCTTTTCAATAATGAGCC10.684931506849315No Hit
CGAGCAGATCATTTGAGTGAAAGAAGCTGTGGGATCAAACCCAATCAAAG10.684931506849315No Hit
AGAACATCAGGTAAATGCTAGCTAGCATGTCTCCTCGAATTTGTGTTAAA10.684931506849315No Hit
ACGATATGATGCAATCAAATGCATGAAGACATTCTTTTGCTGGAAAGAGC10.684931506849315No Hit
GGTGCAACTTTAGCTAGGCGCATTTGCTAATAGATTGAACAGTCTGGGCT10.684931506849315No Hit
CCAGCAGGCAGCTGGGGTGCCATAAAGCTGCTGACATGTGGCGACCGTTC10.684931506849315No Hit
GAACTGAGAAGTTGACAATAAATTATTACTCATCAATGATGTGCGAGATC10.684931506849315No Hit
GGCAGGAGGGAAGAGAGGCCGCCTTCAAGCTGGGAGAGAGAAAAAGCCTT10.684931506849315No Hit
GGCAGGAAGATTATGCCCGCTTGAGGCCTCTCTCCTATCCGGACACTGAT10.684931506849315No Hit
TGTGAAAGTGTATACCCTCCTCTTTCCTCAAATTTATGTCATTTCACAAG10.684931506849315No Hit
CGAAAGCAGGGAATGAGCAGAAGGAAAACAATGAATGTGCTAAAAAACAG10.684931506849315No Hit
CCCCCAAATGACTCCAAATGACTTCTATTCTGTTTCCTTTGTGGGCCTTC10.684931506849315No Hit
GTCGAAAAACAGGAAACTCTGAGATTGACGACGTAATTTACCAGGCACGG10.684931506849315No Hit
GAGCAGATGTACACTCCAGGAGGAGAAGTGAGAAATGATGATGTTGACCA10.684931506849315No Hit
CTACTAAACACTGCGCCTCTCCCCTTCCCAGTCCATGCGGAACAGTTCAT10.684931506849315No Hit
GTATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTC10.684931506849315No Hit
AGTATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACT10.684931506849315No Hit
GGAGAACAGTTGCTGAGAGGGTCGGGCACTGTGAATTATGAGGGTAGGGG10.684931506849315No Hit
CCCCTGGTGGGGAAGCTTCCCCCACACAAAGCATTGATTTTAAGAGATGT10.684931506849315No Hit
GCTCAGATAAATTAAAATTTATAATGAACAAAGAGTGTTGTGATTATTGA10.684931506849315No Hit
GCCAGATACAAATCCCTTAAAAAAAAAAAAAAGAAAACAATTACTCCAAA10.684931506849315No Hit
GTCCGAGGTGCTTCCTGGGGAAAGAGAAAGGTGAACAAAGTGACCAGGTC10.684931506849315No Hit
TCTGTGTGCTCTTCAGGTCGGCTGCATATCCTGACCCCTGCTCATTTTGA10.684931506849315No Hit
ATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACACCATG10.684931506849315No Hit
CATACATTAAGTGGCACTAATTACACAGTAAATATAAGGTAACTAACATG10.684931506849315No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers