FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S2_R1_B03_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S2_R1_B03_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGCGCCCGTCTTCAGCACCGGGTATGCTGCCTATAAGTGTGTGAGTG111.11111111111111No Hit
GGTGTTATGGCTTACACAAGTGGTTAGTCTTTGTATCGGTCTTACGACGA111.11111111111111No Hit
TGTCGCAAGTGAATCTACGACAAAAGAAAAACACAAAGAGAATAAAAACT111.11111111111111No Hit
GTGGTGCACCCCAGGACACCCCGATAGTTCCACCAGTAGCAGTGGATAAT111.11111111111111No Hit
GTCCCACACATCCGAGGCCATCTCTTCCTGACTCAGTCTTCTTAGCAGAT111.11111111111111No Hit
ATGTGGGCCAGTGCCCATGGAGGAGGGCAAGGGTTAGGTCCAAGTGGAAT111.11111111111111No Hit
AATACTACCTGTATTGTAACAACTTACAAATTTGGGTCACTACCCAAACC111.11111111111111No Hit
TGCTTAACCAACTGAGCCACCCAGGTGCCCATATGACTGGTTTGCAAAGA111.11111111111111No Hit
GTATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTG111.11111111111111No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)