FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S1_R1_F09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S1_R1_F09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA21.9047619047619049No Hit
TCTGACAACCTCGAAAGTATGTGAGAGATTCGCTTCCATTGATCCCTCTT10.9523809523809524No Hit
CATCAGTATCATTTCTCAAATGAGACCTTCCTTTTATAATGAACCCATAC10.9523809523809524No Hit
GACTATGTTAGGCTCTTTCCAGCCAAAGAATGTCTTCATGCATTTGATTG10.9523809523809524No Hit
CATCCTGTGCCTCCTTGGCACTGAGATCTGCATGGCCAGGGTTTGTATCA10.9523809523809524No Hit
CTCCATGCTGGAGTATTCATCTACTCCCATTTTGCTGACTCTTATCCCTC10.9523809523809524No Hit
AAATTGATATTGTTAGATCACCACAGGCAGTTGTGGTAGAATAGACATTA10.9523809523809524No Hit
GTTCCTGACTCTCTATATATCAGAAAAGTATTCAAGATGGAGATAATCTC10.9523809523809524No Hit
TCATTGGCTTTGCCCAGGCCTCCCATTCATCTTGCACTTCTCTGAAGCAG10.9523809523809524No Hit
AAAGAAAGCTGCCTCCAAGCCTCTAGGCAGCTTGCAGGGGGAGTCCTTTC10.9523809523809524No Hit
ACATTGTGGGATCTTGTGACCATTGAATTTTCACAATTTCCCACTTCCTG10.9523809523809524No Hit
GTCAGGCTCCACACACAGCTGTGTGTCTGATGGAGACTGTCTCCCTCTCC10.9523809523809524No Hit
GACCCTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTT10.9523809523809524No Hit
ATGTAATACCTATCAAAATACCAATAACACTTCTCACAGAACTAGAACAA10.9523809523809524No Hit
CCCTTCATTATGTATTCAGTAGCCCTGCAGTGGGACACTTCTGCTGTAAA10.9523809523809524No Hit
CGCCTACACTGGGCCGTCTGCCATTCCGCTGCAGCCCAGGACCCCTTCTA10.9523809523809524No Hit
TTTCCAAGAGAGATGCTAATGGGTCTGCTGACACTGCTGCTCTTCTTACT10.9523809523809524No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTGGTTGCGCAAA10.9523809523809524No Hit
GCAGAAATGCTAGCAAGCATTGACCTGAAGTACTTCAATGAATCAACAAA10.9523809523809524No Hit
GGACCACTACCTGAGGATAATGAACCAAGTGGGTATGCACAAACAGACTG10.9523809523809524No Hit
GCCAAGAGAAAGGAATAAAAGGCATCCAAATTGGTAAGGAAGAAGTAAAT10.9523809523809524No Hit
GTGCCACAGCACACAGATTGGAGGAGTAAGGATGGTGGACATCCTTAGAC10.9523809523809524No Hit
ATCAAAAATAAAAGTAAAATCATACCTACGATGATAAATCTCTAGCTATT10.9523809523809524No Hit
AAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAG10.9523809523809524No Hit
ACATGGTACCTTCGGCCCTGTCCACTTCAGAAATCAAGTTAAAATAAGGA10.9523809523809524No Hit
CTATTAGAAGAGGCCTTATTTTCTAAATTTTGGTCTTTGTTGATTCATTG10.9523809523809524No Hit
CTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCG10.9523809523809524No Hit
TCCTTAGACAGAATCCAACTGAGGAACAAGCCGTAGACATATGCAAGGCA10.9523809523809524No Hit
ACATATAGGTGCCATAGGGGAGACACACAAATTCAGACGAGAAGATCATT10.9523809523809524No Hit
GACTGGTGGAGGCAGTCACCGGCGCAGTAAGAAGGCCAAGGCCCCTGAAA10.9523809523809524No Hit
CTGGAGAATTGCCTCTTACCAGTATCCTCACCCCTGCTCCTCTCACATTC10.9523809523809524No Hit
AGGTGAGATTGACTGGATGTTTACCATAGGCTGAGAAGTGCTGATAAAGC10.9523809523809524No Hit
GGTGAAGAAGCCGGCCCAGCCCGATGCTGGGGTTTCTTCTCTCATCTTGT10.9523809523809524No Hit
ATCTTGATGTTCAAGATTATCACAAACTATTTCTTGGGTTCTGACGTACT10.9523809523809524No Hit
ACCAAGACCTGAGCTGAGATAAACAGTCAGATTATTAAACAACTGAGACA10.9523809523809524No Hit
GAACAGCCCGCAAGGGACAAAATTGCAAAAGAAATTCCAGCTTCTCTAAG10.9523809523809524No Hit
GACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGAT10.9523809523809524No Hit
GTATGTAGACATTATAATGATCTTATTTAGTTCCGTGCACAAAAATAATT10.9523809523809524No Hit
CTTTTAATCAGATTCACAAGTTTCCTCTCATTGTTGCCCTGTTTGCACTG10.9523809523809524No Hit
GCACCCCCCGCAGCAGATGGCGCTCCTGGACCAGACTAAAACCTTGGCCG10.9523809523809524No Hit
GGGCTGGATGTCCCCCCTAAACCTCTCTGGGGATCTGACGTGTGTCCCAT10.9523809523809524No Hit
CTTAAGAACCTGACAGAGGCCCTCACAGGGACCGGGATGCTGCCTGAATA10.9523809523809524No Hit
GCAGCCCAGCAGCAGTCACTTGGGCGATCACCCAAGTCAGAAACACCAGA10.9523809523809524No Hit
AATCTGTGTGCTGTGGCACATTTCCAAGAGAGATGCTAATGGGTCTGCTG10.9523809523809524No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTC10.9523809523809524No Hit
GTCCTGGGATGATGATGGGCATGTTCAACATGCTAAGTACGGTCTTGGGA10.9523809523809524No Hit
CCTGGCCAAGCTGTGCAGCCATGGTGCCATGCGGTCCTGGGAGTTGATGG10.9523809523809524No Hit
GCACTATATTACAATACAACTAAAGGCACGTGAGTGGCTCAGTCGGTTAA10.9523809523809524No Hit
ACATGATAAACAATGACCTTGGACCTGCAACGGCCCAGATGGCTCTTCAA10.9523809523809524No Hit
CTGTGTTCTAGAGGCTATGGCTGTCCTTGAAGACACCCACCCATGAATAT10.9523809523809524No Hit
GGGTGGTGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAA10.9523809523809524No Hit
CCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGA10.9523809523809524No Hit
AGGCAACCAGAGCTTGTGTTTGGAGTCTAACTTTCAACAGGGGATGTTTG10.9523809523809524No Hit
CTTCAAGGTGGTTTTTGAAGCATTCGACACTGAGGCAAGGGCGACCGAAT10.9523809523809524No Hit
TGTTTATCCACATCAATATGCGCACCCGTAAAGTCTTGTTTAGCAGTGAT10.9523809523809524No Hit
CTTCTCAAAGAACTAGAACAAATAATACTAAAATTTGTATGTAACCACAA10.9523809523809524No Hit
CCCCCTAATAGCTGGCAAATGAATAAATTAGGCACAGGTCACTCAAATGG10.9523809523809524No Hit
CTTTACATTGTTACAAAAGAAAAAAAAGTTTTTACTGTCATGTTTATTGC10.9523809523809524No Hit
ATATTCTTCCCTCATGGACTCAGGCACTCCTTCCGTAGAAGGCCCTCTTT10.9523809523809524No Hit
CCACTCGGGTTGATTTCTGGTGATATATGTAATCATCGCCAGGAACATTC10.9523809523809524No Hit
GCTTTGCACTTTCCATCATTCTTATAACTTCTGTTCGCATGTCGGATGTC10.9523809523809524No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.9523809523809524No Hit
ATGGTATTCTCACAGGAGGATTGCATGATCAAGGCAGATAGGGGCGATCT10.9523809523809524No Hit
TCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCGTC10.9523809523809524No Hit
AGACCTCTTAACAATATTGTTCTTCCAATCCATGAGCATGGATTGTCTTC10.9523809523809524No Hit
ACCCAGGGAGATAAGAGCAAATATTTAAACTGAAAAAATGAAAGAACATT10.9523809523809524No Hit
GACTGTTTCAGGCTGGAGATTACTGGAGCTGATATGAGCAGATGTGCCGG10.9523809523809524No Hit
TAAGTATGTCGTGGAAGAGAAGGTAATCGTGAAATTTCTCCAACTATTGC10.9523809523809524No Hit
GACTTATGAATGGACATTAAACAGAAATCAACCGGCAGCAACTGCATTGG10.9523809523809524No Hit
ATCTAATAAGAGCACTGACATTAAATAAGATGAGCAAAGATGCAGAGAGA10.9523809523809524No Hit
CCAAAAGGGCTCAGCACTCCTTGGCTGCCCATAAGAAAGCCAGACCAAGG10.9523809523809524No Hit
GGTTATGAGTGTAAACAGCACAAGTAAATACTCGAAAAAGCTCTCCCTGT10.9523809523809524No Hit
TCTTAGTGTATGATTAATGGCCTTTTTCAGTTATCTATAATTTCCCTAAG10.9523809523809524No Hit
ATATATGTGTGATTAGATAAAGATAAGTTGTAGAATAAACAACTAAACTA10.9523809523809524No Hit
GAGGAGGCAGTGGTTAGATTGAAGGGTTGCACGGAACCGCAGGGACGTGC10.9523809523809524No Hit
CAGGTGAGAGCAGTCAGGCACCTCTTGAGCTCACTTGCAAGAGGTCTCTC10.9523809523809524No Hit
CGTCCAGCCAGCAGTCTCCCCGCCTGCCTGACCTGGGCTGGATGTCCCCC10.9523809523809524No Hit
CTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCTTCCCCGATAA10.9523809523809524No Hit
GCTCCCAGCACGTCCCTTGGGTTAAGTGCAACACTTCAATATAAACACTG10.9523809523809524No Hit
CATTATTGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGGTGATTTC10.9523809523809524No Hit
CCAAAAACTCAAAGAAGCTCATGGATTAACTGGAATTTCACTTCCTGCCC10.9523809523809524No Hit
TTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG10.9523809523809524No Hit
GTACTATTGTCTCCCGAAGAAGTCAGTGAAACGCAAGGAACTGAGAAGTT10.9523809523809524No Hit
CCACAAGTCCCAGGACAGATGGAGGGGAGAGGGAATGAGAGGCCATGGCC10.9523809523809524No Hit
GTTGCACTTAACCCAAGGGACGTGCTGGGAGCAGATGTACACTCCAGGAG10.9523809523809524No Hit
GCTGACTCTTATCCCTCTCAGCGACATCTCCGTGCTTGGGGTCATGTCGG10.9523809523809524No Hit
CTCTTATCCCTCTCAGCGACATCTCCGTGCTTGGGGTCATGTCGGGCAGT10.9523809523809524No Hit
CTTAAATTCCACATAAGAGTGATATCATATGGATTTGTCTTTCTCTGACT10.9523809523809524No Hit
GGACAGCACAGACTGCAACAGTGAGAGTAGCAGTGGAGGTAAAAGCCAAG10.9523809523809524No Hit
TCTCTAGATAGTAGCCTGGGATTCAGACCCAGATTTGTTAGCATCAGAGT10.9523809523809524No Hit
GGCCCTGCAACGGCCCAGATGGCTCGTCAATTGTTCATGAAAGCCTACAG10.9523809523809524No Hit
CTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGG10.9523809523809524No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGCACATGATTCCAGAGA10.9523809523809524No Hit
GGACAAGTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAA10.9523809523809524No Hit
ACAGCATACCGCTCTTGATCTCGGGGTCATGAGTTGGAGCCCCGTGTTCG10.9523809523809524No Hit
CTTGGTATGTTCCTGGTGGAAATATTATTTAGATAGCCTTTCTGTTGAGC10.9523809523809524No Hit
GGAGAGAGAAGCCCAGGGAGACTCTGCGCTCAGCACGGAGCCCAACATGG10.9523809523809524No Hit
GGATGACAGGAGAAACATGGGCACACAGATGCCACAGCCGACCTTCACGC10.9523809523809524No Hit
ATGAATACACAGTTCACAGCAGTAGGTAAAGAGTTCAACCACCTGGAAAA10.9523809523809524No Hit
AATTGGATCAGCCCACATTACTCCTTAGTTCCTGGGAACTTTAGTCTTGT10.9523809523809524No Hit
ATTCAATGTGGGGCTTGGTTTCCAATCAAACAGCTCATGTTTCCAGCATC10.9523809523809524No Hit
GAGTTAGTTTATCTACCCTTGTTTGTTGAACAACTTCCATTGTTTCAAGG10.9523809523809524No Hit
GGATTACATCGAATAGGTAGATTTTGTGTAGTATAGATGTCTTAAAAATA10.9523809523809524No Hit
GTCCTGTAGCTCTGCTAGCACCAGCTTCCAAGCCATGAGCTAATTGTGAT10.9523809523809524No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers