HTGTLBGXG_n01_S1_R1_D03-FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTGTLBGXG_n01_S1_R1_D03-FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1107894
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATATTCAATATGGAAAGAATAAAAGAACTAAGAAATCTAATGTCGCA	3833	0.34597172653701525	No Hit
TTTTTAAACTATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG	3565	0.3217816866956586	No Hit
GTATATACATACATATATACTTACACAGTTTGAGCATTCACAGGCCACTA	2456	0.22168185765064166	No Hit
CATATATACTTACACAGTTTGAGCATTCACAGGCCACTAGAAGCCCATCT	2386	0.21536356366222761	No Hit
TGTATATACAGCTCGCTGAAGAGGTCCATGACCTCAAAAAAGATCAAATG	2219	0.2002899194327255	No Hit
GAATAAAAGAACTAAGAAATCTAATGTCGCAGTCTCGCACCCGCGAGATA	1989	0.17952981061365075	No Hit
GTATATATGTATGTATATACAGCTCGCTGAAGAGGTCCATGACCTCAAAA	1734	0.15651316822728528	No Hit
ATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCT	1377	0.12428986888637361	No Hit
ATCTAATGTCGCAGTCTCGCACCCGCGAGATACTCACAAAAACCACCGTG	1290	0.11643713207220185	No Hit
GGTCAATTATATTCAATATGGAAAGAATAAAAGAACTAAGAAATCTAATG	1289	0.11634687072951022	No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACACTAATTGATGGCCATCC	1180	0.10650838437612263	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGCGAAA	205	81.366516	1
CTATTCG	965	56.344154	9
TATATTC	1455	47.8433	3
ATTATAT	1490	47.21252	1
TCAATAT	1420	46.96933	8
GGTCAAT	605	46.74993	1
ATATTCA	1590	44.23719	4
ACTATTC	1285	43.441265	8
GTCAATT	625	42.927402	2
TTCAATA	1590	42.403404	7
TATTCAA	1660	41.49812	5
TTATATT	1595	41.370773	2
ATTCAAT	1805	39.7714	6
TAAACTA	1500	39.156754	5
CAATATG	1840	37.430073	9
TTAAACT	1680	35.824635	4
CGAAAGC	510	35.545345	3
AAACTAT	1695	34.224194	6
TCAATTA	805	33.32873	3
TTTAAAC	1885	32.313263	3