FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S1_R1_C07_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S1_R1_C07_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2416
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAAGAGAGGCTATCTAATAAGAGCACTGACATTAAATACGATGACCA80.33112582781456956No Hit
TCCCAGGACTCAGTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTC80.33112582781456956No Hit
ACTTAGTGTTGTCCCCAGTGATTGTGAAAGAAATCTCTGTGTCTTGTGAA70.2897350993377483No Hit
GGCTAATAGATTTCTTAAAGGATGTAATGGAATCAATGAACAAAGAGGAA70.2897350993377483No Hit
CAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAAC70.2897350993377483No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT70.2897350993377483No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA70.2897350993377483No Hit
CCTATAATGTTCTCAAACAAAATGGCAAGACTAGGGAAAGGGTACATGTT70.2897350993377483No Hit
AACTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATG60.24834437086092717No Hit
ATATGTAATCATCGCCAGGAACATTCGAGGATTTTGATTTTCATTCCACT60.24834437086092717No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT60.24834437086092717No Hit
AAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTATGGAT60.24834437086092717No Hit
CTATTAGAAGAGGCCTTATTTTCTCAATTTTCTTCTTTGTTGATTCATTG60.24834437086092717No Hit
CAATAGTACGTTCCCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATAC50.20695364238410596No Hit
CATATAGGTGCCATAGGGGAGACACACAAATTCAGACGAGAAGATCATTT50.20695364238410596No Hit
CACATATAGGTGCCATAGGGGAGACACACAAATTCAGACGAGAAGATCAT50.20695364238410596No Hit
ATATAAACACTGCCTGTTCCGCCGGCTACTGGGAGAAACCTTGTTTTACG50.20695364238410596No Hit
TTCCTGAAGTCTGCTTAAAATGGGAGCTAATGGATGATGATTATCGGGGA50.20695364238410596No Hit
GTATAACATTGTGGGATCTTGTGACCATTGAATTTTCACAATTTCCCAGT50.20695364238410596No Hit
GAATATGATGCCGTTGCAACTACACATTCCTGGATTCCCAAGAGGAATCG40.16556291390728478No Hit
GATGTACACTCCAGGAGGAGAAGTGAGAAATGATGATGTTGACCAAAGTT40.16556291390728478No Hit
GGGTAGCTCCATGCTAAAATTAGCCACAAATCCATAGCGATAAAAAAAGC40.16556291390728478No Hit
ATATAAAACTTATTTCGAAAAGGTCGAAAGGTTGAAACATGGTACCTTCG40.16556291390728478No Hit
CTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCTTCCCCGATAA40.16556291390728478No Hit
CATAGTGAATGCACCAAACCATGAGGGAATACAAGCAGGAGTGGACAGAT40.16556291390728478No Hit
CTTCAGGTCAATGCTTGCTAGCATTTCTGCTGGTATTTGTGTTCGAATCT40.16556291390728478No Hit
GCCTTGATCATGCAATCCTCCTGTGAGAATACCATGGCCACAATTATTGC40.16556291390728478No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG40.16556291390728478No Hit
GATTAGAGGTTTCGTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCG40.16556291390728478No Hit
GTATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTG40.16556291390728478No Hit
GGATTACAAAGTCTTCCCCGATAATCATCATCCATTAGCTCCCATTTTAA40.16556291390728478No Hit
TCTGTAGTCTTTGATGAACAATTGAAGAGCCATCTGGGCCGTTGCAGGTC40.16556291390728478No Hit
ATGTAATCATCGCCAGGAACATTCGAGGATTTTGATTTTCATTCCACTTA40.16556291390728478No Hit
CTGTTAGGCCATTCGATCTAAAGACTTCTATGGTGTTGGCCAATGCAGTT40.16556291390728478No Hit
TTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG40.16556291390728478No Hit
CTCCAGGAGGAGAAGTGAGAAATGATGATGTTGACCAAAGTTTGATTATC40.16556291390728478No Hit
ATCTGATACTAATAGCCCTACCTTTGATTGGGTTTGATCCCACAGCTTCT40.16556291390728478No Hit
GTCCACTTCAGAAATCAAGTTAAAATAAGGAGGAGAGTTGATACAAACCC30.12417218543046359No Hit
ACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTTGAAACAT30.12417218543046359No Hit
GTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTCTCAATTTTCTTC30.12417218543046359No Hit
ATTTGACACTGTCCAAATAATAAAACTTCTCCCCTTTGCTGCTGCCCCAC30.12417218543046359No Hit
GTCATAAAGAGATTGATTCTGTAAACAATGCTGTGGTAATGCCAGCCCAT30.12417218543046359No Hit
GCTTTGGAGTGTCTGGAGTAAATGAATCAGCTGACATGAGTATTGGAGTA30.12417218543046359No Hit
ATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGGAGCTAATGGA30.12417218543046359No Hit
CCTCTAATCTGCATCCCAGGTGTTGCGATAGCCCTTCTTTTTAACTTGCC30.12417218543046359No Hit
AAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAAT30.12417218543046359No Hit
GCTTAAAATGGGAGCTAATGGATGATGATTATCGGGGAAGACTTTGTAAT30.12417218543046359No Hit
ACACTAAGTGGAATGAAAATCAAAATCCTCGAATGTTCCTGGCGATGATT30.12417218543046359No Hit
GGGCCGAAGGTACCATGTTTCAACCTTTCGACCTTTTCGAAATAAGTTTT30.12417218543046359No Hit
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT30.12417218543046359No Hit
CTACAGATACACATATAGGTGCCATAGGGGAGACACACAAATTCAGACGA30.12417218543046359No Hit
GTCTTGGGAGTCTCGATACTGAATCTTGGACAAAAGAAATACACCAAGAC30.12417218543046359No Hit
GTGTCAAATGTCCCAAGCACATCCCGCATTTGCTGGAACAGTGTCCTTAC30.12417218543046359No Hit
GTCTTATTTATATAGGACTTCTTTTTGCTCATGTTGATTCCCACTAACTT30.12417218543046359No Hit
GTAGGGGGCAATGAAAAGAAGGCCAAACTGGCAAATGTTGTGAGAAAGAT30.12417218543046359No Hit
ATCATAAGTCTGGCGACCTTGAGTTAGTTTATCTACCCTTGTTTGTTGAA30.12417218543046359No Hit
GCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTGGTGATATATGTAA30.12417218543046359No Hit
ATGCAGATCTCAGTGCCAAGGAGGCACAGGATGTGATTATGGAAGTTGTT30.12417218543046359No Hit
TTATGGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG30.12417218543046359No Hit
TCCTTAGACAGAATCCAACTGAGGAACAAGCCGTAGACATATGCAAGGCA30.12417218543046359No Hit
GCTACCCAGCTTTGGAGTGTCTGGAGTAAATGAATCAGCTGACATGAGTA30.12417218543046359No Hit
ACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCAT30.12417218543046359No Hit
CGTAAGGACACTGTTCCAGCAAATGCGGGATGTGCTTGGGACATTTGACA30.12417218543046359No Hit
ATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCATAGT30.12417218543046359No Hit
GATAATGAACCAAGTGGGTATGCACAAACAGACTGTGTTCTAGAGGCTAT30.12417218543046359No Hit
GTCAATTGCTGAGGCAATAATTGTGGCCATGGTATTCTCACAGGAGGATT30.12417218543046359No Hit
CACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC30.12417218543046359No Hit
GGATGATGATTATCGGGGAAGACTTTGTAATCCCCTGAATCCCTTTGTCA30.12417218543046359No Hit
AGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCGATCATGGAAAAG30.12417218543046359No Hit
ACTCTGTTCTGGTGGGGCAGCAGCAAAGGGGAGAAGTTTTATTATTTGGA30.12417218543046359No Hit
GCAATGGAGTTAATCAGAATGATCAAACGTGGAATCAATGACCGAAATTT30.12417218543046359No Hit
GTCCTGGGATGATGATGGGCATGTTCAACATGCTAAGTACGGTCTTGGGA30.12417218543046359No Hit
GTGTTTATATTGAAGTGTTGCACTTAACCCAAGGGACGTGCTGGGAGCAG30.12417218543046359No Hit
CTTGATGGTGGCGTACATGCTAGAAAGAGAATTGGTCCGTAAAACAAGGT30.12417218543046359No Hit
GTTAAAAAGAAGGGCTATCGCAACACCTGGGATGCAGATTAGAGGTTTCG30.12417218543046359No Hit
ATGTAGATGGATTCGAGCCGAACGGCTGCATTGAGGGCAAGCTTTCCCAA30.12417218543046359No Hit
CATTAAATACGATGACCAAAGATGCAGAGAGAGGCAAGTTAAAAAGAAGG30.12417218543046359No Hit
ATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGT30.12417218543046359No Hit
CAAACAGACTGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCC30.12417218543046359No Hit
GTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCCAGGAATATTTGA30.12417218543046359No Hit
ATTGGAGCCCATCCCACCAGTATATTGTCTTGGTGTATTTCTTTTGTCCA30.12417218543046359No Hit
TAATAAAACTTCTCCCCTTTGCTGCTGCCCCACCAGAACAGAGTAGGATG30.12417218543046359No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC30.12417218543046359No Hit
GAAAATAAGAGTACATGAAGGGTATGAAGAATTCACAATGGTTGGGAGAA30.12417218543046359No Hit
CCCTGAGTCAGTGCTAGTCAACACTTATCAATGGATAATCAGGAACTGGG30.12417218543046359No Hit
GTCCCTGTCTTATTTATATAGGACTTCTTTTTGCTCATGTTGATTCCCAC30.12417218543046359No Hit
CATTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTC30.12417218543046359No Hit
GCTGACATGAGTATTGGAGTAACAGTGATAAAGAACAACATGATAAACAA30.12417218543046359No Hit
GCCCTGCAGTGGGACACTTCTGCTGTAAAATAGTTCCTCCTCATGCTTGC30.12417218543046359No Hit
TCTCAGTTCCTTGCGTTTCACTGACTTCTTCGGGAGACAATAGTACGTTC30.12417218543046359No Hit
GAATGTGAGAGGATCAGGGTTGAGGATACTGGTAAGAGGCAATTCTCCAG30.12417218543046359No Hit
CTGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATGGTTTGGTGCATT30.12417218543046359No Hit
CTCTTATTCAGTCTTTGTTTTTTCTTCCCTATTGTTCTTTGCGTGACCAT30.12417218543046359No Hit
GGCTATTAGTATCAGATGGAGGACCAAACTTATACAATATACGGAATCTT30.12417218543046359No Hit
GTCCAAATAATAAAACTTCTCCCCTTTGCTGCTGCCCCACCAGAACAGAG30.12417218543046359No Hit
GCTTGGGACATTTGACACTGTCCAAATAATAAAACTTCTCCCCTTTGCTG30.12417218543046359No Hit
GTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCTAGACACCATG30.12417218543046359No Hit
TCATTCCACTTAGTGTTGTCCCCAGTGATTGTGAAAGAAATCTCTGTGTC30.12417218543046359No Hit
AACTAACTCAAGGTCGCCAGACTTATGATTGGACATTAAACAGAAATCAA30.12417218543046359No Hit
CTTCTAATAGATGGCACAGCATCACTGAGTCCTGGGATGATGATGGGCAT30.12417218543046359No Hit
ACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCAT30.12417218543046359No Hit
GTACAGTTCATTACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAA30.12417218543046359No Hit
GTGAATTAGTCATCATCTTTCTCACAACATTTGCCAGTTTGGCCTTCTTT30.12417218543046359No Hit
TGCTGGAACAGTGTCCTTACGAATCCACTGTACCGGCTTCTGGTTGCCTT30.12417218543046359No Hit
CAGTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTCTCAATTTTCT30.12417218543046359No Hit
GGTCCTGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATGGTTTGGTG30.12417218543046359No Hit
CTCCAGCACGGAGAGAGTGGTAGTGAGTATTGACCGATTTTTAAGGGTTA30.12417218543046359No Hit
GTTCAGAAACATCCTGAGCATGGCACCCATAATGTTCTCAAACAAAATGG30.12417218543046359No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA30.12417218543046359No Hit
GAGTAAGAGACAACATGACCAAGAAGATGGTCACGCAAAGAACAATAGGG30.12417218543046359No Hit
GCATTGACCTGAAGTACTTCAATGAATCAACAAAGAAGAAAATTGAGAAA30.12417218543046359No Hit
GTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAACAGATC30.12417218543046359No Hit
CGCAAGGAACTGAGAAGTTGACAATAACTTATTCGTCATCAATGATGTGG30.12417218543046359No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCCAGG100.0066591203145.01