HTGTLBGXG_n01_S1_R1_C07-FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTGTLBGXG_n01_S1_R1_C07-FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	394789
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTGGGGTGAGTCACAGTTCTCAAAACATAGAGTAAATCCTGTCACTT	674	0.17072410832115384	No Hit
CTACAGGTATGGCCACAGTTGACAGAGTATTGGGGTGAGTCACAGTTCTC	513	0.12994283022070016	No Hit
TTACCATACAGATGACTGTGCTTTTTAAAGTAACAGACTCTGAACTCCAA	468	0.11854433634169137	No Hit
GTGCAGCAGCTACTGAAAACAATATGGCAGTTCATCAAAAAATTAAAAAT	444	0.11246513960622004	No Hit
CTATAATACACAGGTAAAATAATCTAAGTATGTGTAGTTCTAGAAACTGG	438	0.11094534042235218	No Hit
GAATAAAGGAAATAGCCCTTTTTTATCAAGTGGATCTGAAAAGCTCTTGG	416	0.10537274341483678	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTAGTT	20	3.8643455E-4	108.74972	7
AGCGAAA	110	0.0	92.28417	1
TACTGAT	50	2.0087732E-4	57.99985	7
AGGTAGT	40	0.006048247	54.37486	6
ACGTCGC	40	0.006048247	54.37486	145
CTACAGG	150	1.0913936E-11	48.33933	1
AAAGACG	45	0.009634949	48.333206	8
TATACCT	80	3.7305792E-5	45.31238	4
GTACTGA	65	7.331261E-4	44.61527	6
ACAAGGG	115	1.408298E-7	44.13591	3
TATAGTG	110	5.251726E-6	39.550358	2
AGGGTGT	150	2.5927875E-8	38.666565	6
AGTGTTA	75	0.0014823166	38.666565	6
CGAAAGC	265	0.0	38.306637	3
AGTATAC	95	1.0270095E-4	38.162632	2
ACCTGAC	115	7.1318645E-6	37.82599	7
TATGTAC	135	4.9564005E-7	37.597256	3
AGGCTAC	180	3.1886884E-9	36.249905	7
GGCTACC	180	3.1886884E-9	36.249905	8
GTAGAAA	205	2.910383E-10	35.37024	1