FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S1_R1_B05_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S1_R1_B05_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTTGATTGGGTTTGATCCCACAGCTTCTTTAACTCAAATGATCTTCT14.761904761904762No Hit
GGCTACATACAGTAAAGACAACAGTGTAAGAATCGGTTCCAAGGGGGATG14.761904761904762No Hit
ATTTTGGACAACGCGTCTACGCTGCAGTCCTCGCTGCCTGGGCCCGGTGA14.761904761904762No Hit
CATTCACATCTTTTCATTCACTGGAGAGGAGATGGCCACCAAAGCGGACT14.761904761904762No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA14.761904761904762No Hit
GTCTCCCACCGAACTTCCCCAGCCTTGAAAACTTTAGAGCCTATGTAGAT14.761904761904762No Hit
AAATAAGACCCTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGT14.761904761904762No Hit
ATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT14.761904761904762No Hit
GCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTGGTGATATA14.761904761904762No Hit
GGCGTCGCGCCTCTTTCAGTTTTGGGGGGTGCCCTTTCATAAGGCCACGC14.761904761904762No Hit
GTCCTCAAGAATGGTTCAATTTTGGCGTTCACTCCTTTTGACATTTGGGA14.761904761904762No Hit
TTCCAAGAGAGATGCTAATGGGTCTGCTGACACTGCTGCTCTTCTTACTA14.761904761904762No Hit
CCCATAATGTTCTCAAACAAAAACGCAAGACTAGGCAAATGGTCCATCTA14.761904761904762No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT14.761904761904762No Hit
ATCTGTGTGCTGTGGCACATTTCCAAGAGAGATGCTAATGGGTCTGCTGA14.761904761904762No Hit
GACTGGCACTGACTCAGGGCCATTGATATCCCCCATCATTGATGACGAAT14.761904761904762No Hit
GGAGTAATCTATGAACTGGAAGTCTTGGTTATCTTCATTTATGATGAATA14.761904761904762No Hit
AAAGCCGGGTCGCTAATAACTAAAGGAGTGCCATCGACGACATGGCGTCT14.761904761904762No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC14.761904761904762No Hit
GTCCCAGATGGCTCTTCAATTGTTCATAAAAGAATACACATACACATATA14.761904761904762No Hit
TCGGAATACTGCCCGACATGACCCCAAGCACGGAGATGTCGCTGAGAGGG14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)