FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n01_S1_R1_A09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n01_S1_R1_A09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA43.8834951456310676No Hit
GGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATG21.9417475728155338No Hit
GCGGAAAAGGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAA21.9417475728155338No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG21.9417475728155338No Hit
TTTTTAAACAATTCGACACTAATTGATGGCAATCAGAATTCTTTTGGTCG10.9708737864077669No Hit
GTCAATTGCTGAGGCAATAATTGTGGCCATGGTATTCTCACAGGAGGATT10.9708737864077669No Hit
AAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTTTGACG10.9708737864077669No Hit
CAATATTGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCC10.9708737864077669No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGAAGTCACGCACTCGCGAGATA10.9708737864077669No Hit
CTTGCTAGCATTTCTGCTGGTATTTGTGTTCGAATCTTCATTCTGTTACT10.9708737864077669No Hit
CACAGCTCACAGCAGTAGGTAAAGAGATCAACCACCTGGAAAAAAGAATA10.9708737864077669No Hit
GGAACAGGATACACCATGGACACAGTAAACAGAACACACCAATACTCAGA10.9708737864077669No Hit
GATTGCATCCTCAAGAATTCCCGTTTGGCTTGTGTTGAGAATAGAACGAT10.9708737864077669No Hit
CTACCACTCTATCCGTGCTGGAGTATTCATCTACTCCCATTTTGCTGACT10.9708737864077669No Hit
GACCATGGGCTGGCATTACCACAGCATTGTTTACAGAATAAATCTCTTTA10.9708737864077669No Hit
GTCCCGCACTCGCGAGCTACTCACTAAGACCACTGTGGCACATATGGCCA10.9708737864077669No Hit
CTTATAACTTCTGTTCGCATGTCGGATGTCCGTCCTTCATTGTTCCCGCT10.9708737864077669No Hit
CACTACGTCCCCTTGCGCAATTAGCTCAATAAACTTCAATCCTTATTCAA10.9708737864077669No Hit
GAGTATTGGAGTAACAGTGATAAAGAACAACATGATAAACAATGACCTTG10.9708737864077669No Hit
GTCTGGGCTCCCAGTAGGGGGCAATGAAAAGAAGGCCAAACTGGCAATTG10.9708737864077669No Hit
GTAGTATCAAGGTCTCTAATCGTTTAAATATTAAACTTAAGTTAGATTTA10.9708737864077669No Hit
GACTGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCCAGGAAT10.9708737864077669No Hit
CACTACGTCCCCTTGCCCAATTAGCACAGTAGCCTTCTCTCCTGTTGCAA10.9708737864077669No Hit
CCGGTCTCCTATATGAACTGCTAGGGAAAAATTTCTCGAATACATCTGTT10.9708737864077669No Hit
GTTCATTGAAATTGGAGTAACACGGAGGGAAGTCCACATATATTACCTAG10.9708737864077669No Hit
CGTCTCCACAACTTGAGGGGTTTTAGGCTGAATCTAGAAAATTGCTTCTC10.9708737864077669No Hit
CTTACACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACTGG10.9708737864077669No Hit
TGGGTGCGATATGTTCAATCGGGGCCACATCTTCTACTCTTTCATCAAGG10.9708737864077669No Hit
ATTCCGATCATTCCCATCACATTGTCGATGGATTCAATGAACCAGTTATG10.9708737864077669No Hit
CAAAGATGATGACTAATTCACAAGACACAGAGATTTCTATCACAATAACT10.9708737864077669No Hit
AATATGCACACATTTGGAAGTTTGTTTCATTTATTCGTATTTCAATTTCA10.9708737864077669No Hit
ATGGACACAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGAC10.9708737864077669No Hit
CTCCATTTGAGAGTAAGCGGGAGAGACTCGCAGTCAATTGCTGAGGCAAT10.9708737864077669No Hit
AAATAGGAGACATGCTCTTGAGGACTGCGATAGGCCAAGTGTCGAGGCCC10.9708737864077669No Hit
CACTACGTCCCCTTGCCCAATTAGCAAATTAGCCTTCTCTCCGTATGCAA10.9708737864077669No Hit
CTTTAGCTAGGAGCATTTGCGAAAAGCTTGAACAGTCTGGGCTCCCAGTA10.9708737864077669No Hit
GGCCTCCCCCATGCTAGAAATTCCAACCGGTCTCCTATATGAACTGCTAG10.9708737864077669No Hit
ACTTCAGTGCATGTGTGAGGAGGGAGTTGAACCAAGATGCATTAAGCAAA10.9708737864077669No Hit
ATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGATGAAG10.9708737864077669No Hit
GTCATACTCCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCA10.9708737864077669No Hit
AGTAGAAACAAGGTCGTTTTTAAACAATTCCACACTAATAGATTGCCATC10.9708737864077669No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGA10.9708737864077669No Hit
CAATGGAAGTTGTTCAACAAAAAAGGGTAGATAAACTAACTCAAGGTCCC10.9708737864077669No Hit
AAACAAGGCAAGAATACCAGAAAGAGTACTTTCATACGATAGATTTGCCG10.9708737864077669No Hit
GGGATAAGAGTAAGCAAAATGGGAGTAGATGAATACTCAAGCACGGAGAG10.9708737864077669No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTC10.9708737864077669No Hit
ACAGTATGGATAGCAAATAGTAGCATTTCCACAACTACTTCAGTGCATGT10.9708737864077669No Hit
GTTCATTGATGCTTAATGCTGGGCAATATCTCTTGTCTTCTTTGCATCAT10.9708737864077669No Hit
TCTATGGTGTTGGCCATTGCAGTTGCTGGCGGTTCATTTCTGTTTAATGT10.9708737864077669No Hit
ACTTAATTTCAGAGCATCCATCAGCAGGAACTTTGACCGCTGATGGCAAA10.9708737864077669No Hit
TATTTGGACAGTGTCAAATGTCCCCAGCACATCCCGCATTTGCTGGAACA10.9708737864077669No Hit
GTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCTAGACACCATG10.9708737864077669No Hit
CAAATATATTCAATATGGACAGAATAAAAGAACTGAGAGATCTAATGTCG10.9708737864077669No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTTG10.9708737864077669No Hit
ATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA10.9708737864077669No Hit
GAAGAGAACAAGCCAATTGAAGTGGGAACTCGGTGAAAATATGTACCCAG10.9708737864077669No Hit
CTATGCGCAAGCTTGCCGACCAAAGTCTCCCACCGCACTTCCCCAGCCTT10.9708737864077669No Hit
GTCAACTTCTCAGTTCCTTGCGTTTCACTGACTTCTTCGTGAGACATTAG10.9708737864077669No Hit
GCTCCAATCATCCGACGATTTTGCTCTCATAGTGAATGCACCAAACCATG10.9708737864077669No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG10.9708737864077669No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.9708737864077669No Hit
GATATATGTAATCATCGCCAGGAACATTCGAGCATTTTGATTTTCATTAC10.9708737864077669No Hit
CTCCATTGGACTCGTTCTATTTGCACCCCTAGATAACCGGTACATAAATC10.9708737864077669No Hit
ATAGTGTATAAGTTTGGTCCTCCATCTGATACTACTAGCCCTACCTTTGA10.9708737864077669No Hit
GAACATTCGAGGATTTTGATTTTCATTCCACTTAGTGTTGTCCCAAGTGA10.9708737864077669No Hit
AGGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTT10.9708737864077669No Hit
GGTCCAGCCAAAAGCATGGAATAAGATGCCGTTGAAACTACACATTCCTC10.9708737864077669No Hit
ATTGAGGCCGAGTCTTCTGTCAAAGAGAAACACATGACCAAGGAATTCAT10.9708737864077669No Hit
AAAATAATGAATTTAACTTGTCCTTCATGAAAAAATGCCTTGTTTCTACT10.9708737864077669No Hit
TCATTAATCAGGCACTCCTCGATTGCTTCATATAGCCCCCCAAGATCGAA10.9708737864077669No Hit
ATAAAGAGCTATACCCTCCCCCTCGGGACTCCGGGCATGACACAGTTATT10.9708737864077669No Hit
GATGGCGAGAATAAAAGACCTTAGATATCGAATGTCGAAGTAACTAAATC10.9708737864077669No Hit
GTCTATATGCGTCTCCACAACTTGAGGGGTTTTCGGCTGAATCTAGAAAA10.9708737864077669No Hit
CCAATTTACTCTTGTGAGCTGGGTTTTCATTTGGTCTCATCAGGCTGACC10.9708737864077669No Hit
GTTTGTTTCATGTATTCGGATTTCCATTTCATCGACGAACGGGGTGGATC10.9708737864077669No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTACCGAACTAGCGAGATA10.9708737864077669No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCC10.9708737864077669No Hit
ATTCACAATGGTTGGGAGAAGAGCAACAGCTATTCTCAGAAAGGCAACCA10.9708737864077669No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC10.9708737864077669No Hit
GCCATAAGCACCACATTCCCTTATACTGCAGATACTCAAAACAGCAAAGG10.9708737864077669No Hit
GGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGA10.9708737864077669No Hit
GGATCTTCAGTCAATGCACCTGCATACTTTCCAAGAACTGTAAGTCGTTT10.9708737864077669No Hit
GAAGAGCACACAGAATGCAATTGACGAGATTACTAAAAAAGTAAATTCGG10.9708737864077669No Hit
GTATCTGCTTCTCAGTTCCTGGGTATTGGAGTCGATGGTTTGCAGTTTGT10.9708737864077669No Hit
CTTCATATAGCCCCCCAAGATCGAAGGTTCCAGGTTCCAGGTTGTCCCTA10.9708737864077669No Hit
GGGAAAGATAGTCAAATCAGTCGAAATGAATGCCCCTAATTATCACTATG10.9708737864077669No Hit
GGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTG10.9708737864077669No Hit
GAAAAGATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTT10.9708737864077669No Hit
GCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTAGTTCTTG10.9708737864077669No Hit
TGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATC10.9708737864077669No Hit
TATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGGAG10.9708737864077669No Hit
ACAATATACTGGTGGGATGGGCTCCAATCATCAAACCATTTTGCTCTAAT10.9708737864077669No Hit
GTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCGAAAAGCTTGAACA10.9708737864077669No Hit
TTGAAGACCCGAGTCACGAGGGGGAGGGAATACCACTATATGATGCAATC10.9708737864077669No Hit
ACCAGAAATCAACCCGAGTGGTTCAGAAACATCCTGAGCATGGCACCCAT10.9708737864077669No Hit
GGCAATAATTGTGGCCATGGTATTCTCACAGGAGGATTGCATGATCAAGG10.9708737864077669No Hit
GGAGAAGATGTTGCCCAGATTGAACATATCGCAAGCATGAGGAGGAACTA10.9708737864077669No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers