Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HTG72DMXY_l02_n01_RS_4sU_0_00h_1_240124 HTG72DMXY_l02_n01_RS_4sU_0_00h_1_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 58334905.0 0.0 151.0 49.0 95.05388465857295 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_RS_4sU_0_00h_2_240124 HTG72DMXY_l02_n01_RS_4sU_0_00h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 48065561.0 0.0 151.0 49.0 95.21789576804782 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_RS_4sU_1000_02h_1_231126 HTG72DMXY_l02_n01_RS_4sU_1000_02h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 57255631.0 0.0 151.0 49.0 94.60513091434294 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_RS_4sU_1000_02h_2_240124 HTG72DMXY_l02_n01_RS_4sU_1000_02h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 68847614.0 0.0 151.0 48.0 96.18552984464056 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_RS_4sU_1000_04h_1_231126 HTG72DMXY_l02_n01_RS_4sU_1000_04h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 52237073.0 0.0 151.0 49.0 94.0349980139755 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_RS_4sU_1000_04h_2_240124 HTG72DMXY_l02_n01_RS_4sU_1000_04h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 38824480.0 0.0 151.0 49.0 95.54104238275069 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_RS_4sU_1000_07h_2_240124 HTG72DMXY_l02_n01_RS_4sU_1000_07h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 39827251.0 0.0 151.0 50.0 95.65064155945934 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_02h_1_231126 HTG72DMXY_l02_n01_Sp1_4sU_1000_02h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 45638491.0 0.0 151.0 49.0 94.17548573642668 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_02h_2_240123 HTG72DMXY_l02_n01_Sp1_4sU_1000_02h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 42691558.0 0.0 151.0 48.0 96.1279534730312 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_1_231126 HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 43441850.0 0.0 151.0 49.0 95.07123662931366 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_2_240123 HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 54040412.0 0.0 151.0 51.0 92.68175315738254 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_07h_1_231126 HTG72DMXY_l02_n01_Sp1_4sU_1000_07h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 46379999.0 0.0 151.0 50.0 93.87064175675222 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_07h_2_240123 HTG72DMXY_l02_n01_Sp1_4sU_1000_07h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 55208732.0 0.0 151.0 51.0 93.36495767518106 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_15h_2_240123 HTG72DMXY_l02_n01_Sp1_4sU_1000_15h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 59877720.0 0.0 151.0 51.0 93.13589138220728 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_Sp1_4sU_1000_24h_2_240123 HTG72DMXY_l02_n01_Sp1_4sU_1000_24h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 48518795.0 0.0 151.0 51.0 92.29289583515671 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_0_00h_1_240124 HTG72DMXY_l02_n01_Sp2_4sU_0_00h_1_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 44644561.0 0.0 151.0 48.0 96.28463012067886 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_0_00h_2_240124 HTG72DMXY_l02_n01_Sp2_4sU_0_00h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 52789154.0 0.0 151.0 48.0 96.45648868695238 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_1_231126 HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 32456468.0 0.0 151.0 48.0 96.54587827417411 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_2_240123 HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 46031357.0 0.0 151.0 49.0 95.41511657764873 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_1_231126 HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 43369435.0 0.0 151.0 49.0 94.13900212687368 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_2_240123 HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 50184510.0 0.0 151.0 49.0 95.76163385552901 151.0 pass pass pass pass fail pass pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_1000_07h_2_240123 HTG72DMXY_l02_n01_Sp2_4sU_1000_07h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 51622071.0 0.0 151.0 50.0 94.84503416156814 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_1000_15h_2_240123 HTG72DMXY_l02_n01_Sp2_4sU_1000_15h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 45798235.0 0.0 151.0 50.0 94.70305250751568 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_Sp2_4sU_1000_24h_2_240123 HTG72DMXY_l02_n01_Sp2_4sU_1000_24h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 47751142.0 0.0 151.0 51.0 94.16752170477753 151.0 pass pass pass pass fail warn pass pass pass pass fail HTG72DMXY_l02_n01_undetermined HTG72DMXY_l02_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 92525694.0 0.0 151.0 42.0 34.568952115171435 151.0 pass fail pass pass fail fail pass pass fail pass warn HTG72DMXY_l02_n02_RS_4sU_0_00h_1_240124 HTG72DMXY_l02_n02_RS_4sU_0_00h_1_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 58334905.0 0.0 151.0 49.0 96.34089689400219 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_RS_4sU_0_00h_2_240124 HTG72DMXY_l02_n02_RS_4sU_0_00h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 48065561.0 0.0 151.0 49.0 96.34502854683835 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_RS_4sU_1000_02h_1_231126 HTG72DMXY_l02_n02_RS_4sU_1000_02h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 57255631.0 0.0 151.0 49.0 96.35814329948948 151.0 pass fail warn pass fail pass pass pass pass pass fail HTG72DMXY_l02_n02_RS_4sU_1000_02h_2_240124 HTG72DMXY_l02_n02_RS_4sU_1000_02h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 68847614.0 0.0 151.0 48.0 97.22251885514575 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_RS_4sU_1000_04h_1_231126 HTG72DMXY_l02_n02_RS_4sU_1000_04h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 52237073.0 0.0 151.0 50.0 96.20010785407761 151.0 pass fail warn pass fail pass pass pass pass pass fail HTG72DMXY_l02_n02_RS_4sU_1000_04h_2_240124 HTG72DMXY_l02_n02_RS_4sU_1000_04h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 38824480.0 0.0 151.0 49.0 96.62676966093545 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_RS_4sU_1000_07h_2_240124 HTG72DMXY_l02_n02_RS_4sU_1000_07h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 39827251.0 0.0 151.0 50.0 96.40813431753034 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_Sp1_4sU_1000_02h_1_231126 HTG72DMXY_l02_n02_Sp1_4sU_1000_02h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 45638491.0 0.0 151.0 50.0 96.41792555713799 151.0 pass fail warn pass fail pass pass pass pass pass fail HTG72DMXY_l02_n02_Sp1_4sU_1000_02h_2_240123 HTG72DMXY_l02_n02_Sp1_4sU_1000_02h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 42691558.0 0.0 151.0 48.0 97.17237339933908 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_Sp1_4sU_1000_04h_1_231126 HTG72DMXY_l02_n02_Sp1_4sU_1000_04h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 43441850.0 0.0 151.0 50.0 96.44282548382927 151.0 pass fail warn pass fail pass pass pass pass pass fail HTG72DMXY_l02_n02_Sp1_4sU_1000_04h_2_240123 HTG72DMXY_l02_n02_Sp1_4sU_1000_04h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 54040412.0 0.0 151.0 51.0 94.19332871098234 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_Sp1_4sU_1000_07h_1_231126 HTG72DMXY_l02_n02_Sp1_4sU_1000_07h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 46379999.0 0.0 151.0 50.0 95.61719376401001 151.0 pass fail warn pass fail pass pass pass pass pass fail HTG72DMXY_l02_n02_Sp1_4sU_1000_07h_2_240123 HTG72DMXY_l02_n02_Sp1_4sU_1000_07h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 55208732.0 0.0 151.0 51.0 94.903328724659 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_Sp1_4sU_1000_15h_2_240123 HTG72DMXY_l02_n02_Sp1_4sU_1000_15h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 59877720.0 0.0 151.0 51.0 94.90552227414112 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_Sp1_4sU_1000_24h_2_240123 HTG72DMXY_l02_n02_Sp1_4sU_1000_24h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 48518795.0 0.0 151.0 51.0 93.72099794594605 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_0_00h_1_240124 HTG72DMXY_l02_n02_Sp2_4sU_0_00h_1_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 44644561.0 0.0 151.0 48.0 97.31586994928854 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_0_00h_2_240124 HTG72DMXY_l02_n02_Sp2_4sU_0_00h_2_240124.fastq.gz Conventional base calls Sanger / Illumina 1.9 52789154.0 0.0 151.0 48.0 97.14448204542906 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_1000_02h_1_231126 HTG72DMXY_l02_n02_Sp2_4sU_1000_02h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 32456468.0 0.0 151.0 49.0 97.29550333696967 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_1000_02h_2_240123 HTG72DMXY_l02_n02_Sp2_4sU_1000_02h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 46031357.0 0.0 151.0 49.0 96.75738122502437 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_1000_04h_1_231126 HTG72DMXY_l02_n02_Sp2_4sU_1000_04h_1_231126.fastq.gz Conventional base calls Sanger / Illumina 1.9 43369435.0 0.0 151.0 49.0 95.6124730702048 151.0 pass fail warn pass fail pass pass pass pass pass fail HTG72DMXY_l02_n02_Sp2_4sU_1000_04h_2_240123 HTG72DMXY_l02_n02_Sp2_4sU_1000_04h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 50184510.0 0.0 151.0 50.0 96.89382504300403 151.0 pass fail warn pass fail pass pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_1000_07h_2_240123 HTG72DMXY_l02_n02_Sp2_4sU_1000_07h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 51622071.0 0.0 151.0 51.0 95.94768716158865 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_1000_15h_2_240123 HTG72DMXY_l02_n02_Sp2_4sU_1000_15h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 45798235.0 0.0 151.0 50.0 96.02801819953861 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_Sp2_4sU_1000_24h_2_240123 HTG72DMXY_l02_n02_Sp2_4sU_1000_24h_2_240123.fastq.gz Conventional base calls Sanger / Illumina 1.9 47751142.0 0.0 151.0 52.0 95.48636895569126 151.0 pass fail warn pass fail warn pass pass pass warn fail HTG72DMXY_l02_n02_undetermined HTG72DMXY_l02_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 92525694.0 0.0 151.0 43.0 48.60047239826626 151.0 pass fail warn pass warn fail pass pass fail warn warn