[2024-02-24 17:25:22,144] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml
[2024-02-24 17:25:22,144] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml
[2024-02-24 17:25:22,144] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml
[2024-02-24 17:25:22,147] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml
[2024-02-24 17:25:22,147] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}}
[2024-02-24 17:25:22,147] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml .
[2024-02-24 17:25:22,490] multiqc [WARNING] MultiQC Version v1.20 now available!
[2024-02-24 17:25:22,490] multiqc [INFO ] This is MultiQC v1.9
[2024-02-24 17:25:22,490] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml .
[2024-02-24 17:25:22,490] multiqc [DEBUG ] Working dir : /vast/gencore/GENEFLOW/work/7d/ccca72fe3f428c0ba019bd71d46f32/2
[2024-02-24 17:25:22,490] multiqc [INFO ] Template : default
[2024-02-24 17:25:22,490] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode]
[2024-02-24 17:25:22,490] multiqc [INFO ] Searching : /vast/gencore/GENEFLOW/work/7d/ccca72fe3f428c0ba019bd71d46f32/2
[2024-02-24 17:25:22,491] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean
[2024-02-24 17:25:22,491] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-43349783/tmpl8_3jeam
[2024-02-24 17:25:22,648] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_0_00h_1_240124_fastqc.html
[2024-02-24 17:25:22,658] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_0_00h_1_240124_fastqc.html
[2024-02-24 17:25:22,731] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_0_00h_2_240124_fastqc.html
[2024-02-24 17:25:22,739] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_0_00h_2_240124_fastqc.html
[2024-02-24 17:25:22,818] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_02h_1_231126_fastqc.html
[2024-02-24 17:25:22,825] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_02h_1_231126_fastqc.html
[2024-02-24 17:25:22,897] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_02h_2_240124_fastqc.html
[2024-02-24 17:25:22,903] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_02h_2_240124_fastqc.html
[2024-02-24 17:25:22,970] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:22,977] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:23,045] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_04h_2_240124_fastqc.html
[2024-02-24 17:25:23,053] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_04h_2_240124_fastqc.html
[2024-02-24 17:25:23,118] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_07h_2_240124_fastqc.html
[2024-02-24 17:25:23,124] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_RS_4sU_1000_07h_2_240124_fastqc.html
[2024-02-24 17:25:23,193] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_02h_1_231126_fastqc.html
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[2024-02-24 17:25:23,270] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_02h_2_240123_fastqc.html
[2024-02-24 17:25:23,277] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_02h_2_240123_fastqc.html
[2024-02-24 17:25:23,344] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:23,351] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:23,419] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_2_240123_fastqc.html
[2024-02-24 17:25:23,427] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_04h_2_240123_fastqc.html
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[2024-02-24 17:25:23,567] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_07h_2_240123_fastqc.html
[2024-02-24 17:25:23,574] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_07h_2_240123_fastqc.html
[2024-02-24 17:25:23,637] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_15h_2_240123_fastqc.html
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[2024-02-24 17:25:23,734] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp1_4sU_1000_24h_2_240123_fastqc.html
[2024-02-24 17:25:23,810] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_0_00h_1_240124_fastqc.html
[2024-02-24 17:25:23,817] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_0_00h_1_240124_fastqc.html
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[2024-02-24 17:25:23,891] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_0_00h_2_240124_fastqc.html
[2024-02-24 17:25:23,960] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_1_231126_fastqc.html
[2024-02-24 17:25:23,969] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_1_231126_fastqc.html
[2024-02-24 17:25:24,044] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_2_240123_fastqc.html
[2024-02-24 17:25:24,053] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_02h_2_240123_fastqc.html
[2024-02-24 17:25:24,123] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:24,129] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:24,200] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_2_240123_fastqc.html
[2024-02-24 17:25:24,207] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_04h_2_240123_fastqc.html
[2024-02-24 17:25:24,282] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_07h_2_240123_fastqc.html
[2024-02-24 17:25:24,289] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_07h_2_240123_fastqc.html
[2024-02-24 17:25:24,356] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_15h_2_240123_fastqc.html
[2024-02-24 17:25:24,363] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_15h_2_240123_fastqc.html
[2024-02-24 17:25:24,435] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_24h_2_240123_fastqc.html
[2024-02-24 17:25:24,444] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_Sp2_4sU_1000_24h_2_240123_fastqc.html
[2024-02-24 17:25:24,515] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n01_undetermined_fastqc.html
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[2024-02-24 17:25:24,599] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_0_00h_1_240124_fastqc.html
[2024-02-24 17:25:24,669] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_0_00h_2_240124_fastqc.html
[2024-02-24 17:25:24,677] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_0_00h_2_240124_fastqc.html
[2024-02-24 17:25:24,754] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_02h_1_231126_fastqc.html
[2024-02-24 17:25:24,765] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_02h_1_231126_fastqc.html
[2024-02-24 17:25:24,839] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_02h_2_240124_fastqc.html
[2024-02-24 17:25:24,847] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_02h_2_240124_fastqc.html
[2024-02-24 17:25:24,915] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:24,921] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_04h_1_231126_fastqc.html
[2024-02-24 17:25:24,991] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_04h_2_240124_fastqc.html
[2024-02-24 17:25:24,998] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_04h_2_240124_fastqc.html
[2024-02-24 17:25:25,072] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_07h_2_240124_fastqc.html
[2024-02-24 17:25:25,080] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_RS_4sU_1000_07h_2_240124_fastqc.html
[2024-02-24 17:25:25,149] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_Sp1_4sU_1000_02h_1_231126_fastqc.html
[2024-02-24 17:25:25,156] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_Sp1_4sU_1000_02h_1_231126_fastqc.html
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[2024-02-24 17:25:25,456] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_Sp1_4sU_1000_07h_1_231126_fastqc.html
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[2024-02-24 17:25:25,774] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_Sp2_4sU_0_00h_1_240124_fastqc.html
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[2024-02-24 17:25:26,331] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_Sp2_4sU_1000_15h_2_240123_fastqc.html
[2024-02-24 17:25:26,408] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_Sp2_4sU_1000_24h_2_240123_fastqc.html
[2024-02-24 17:25:26,416] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_Sp2_4sU_1000_24h_2_240123_fastqc.html
[2024-02-24 17:25:26,485] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_undetermined_fastqc.html
[2024-02-24 17:25:26,492] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HTG72DMXY_l02_n02_undetermined_fastqc.html
[2024-02-24 17:25:26,557] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2024-02-24 17:25:26,563] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2024-02-24 17:25:26,999] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2
[2024-02-24 17:25:27,001] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2
[2024-02-24 17:25:27,022] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 25 samples (table)
[2024-02-24 17:25:27,024] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table)
[2024-02-24 17:25:27,033] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table)
[2024-02-24 17:25:27,040] multiqc [DEBUG ] No samples found: conpair
[2024-02-24 17:25:27,047] multiqc [DEBUG ] No samples found: peddy
[2024-02-24 17:25:27,054] multiqc [DEBUG ] No samples found: somalier
[2024-02-24 17:25:27,061] multiqc [DEBUG ] No samples found: methylQA
[2024-02-24 17:25:27,073] multiqc [DEBUG ] No samples found: mosdepth
[2024-02-24 17:25:27,078] multiqc [DEBUG ] No samples found: phantompeakqualtools
[2024-02-24 17:25:27,082] multiqc [DEBUG ] No samples found: qualimap
[2024-02-24 17:25:27,089] multiqc [DEBUG ] No samples found: preseq
[2024-02-24 17:25:27,095] multiqc [DEBUG ] No samples found: quast
[2024-02-24 17:25:27,101] multiqc [DEBUG ] No samples found: qorts
[2024-02-24 17:25:27,107] multiqc [DEBUG ] No samples found: rna_seqc
[2024-02-24 17:25:27,113] multiqc [DEBUG ] No samples found: rockhopper
[2024-02-24 17:25:27,119] multiqc [DEBUG ] No samples found: rsem
[2024-02-24 17:25:27,137] multiqc [DEBUG ] No samples found: rseqc
[2024-02-24 17:25:27,143] multiqc [DEBUG ] No samples found: busco
[2024-02-24 17:25:27,149] multiqc [DEBUG ] No samples found: goleft_indexcov
[2024-02-24 17:25:27,154] multiqc [DEBUG ] No samples found: disambiguate
[2024-02-24 17:25:27,160] multiqc [DEBUG ] No samples found: supernova
[2024-02-24 17:25:27,180] multiqc [DEBUG ] No samples found: deeptools
[2024-02-24 17:25:27,186] multiqc [DEBUG ] No samples found: sargasso
[2024-02-24 17:25:27,192] multiqc [DEBUG ] No samples found: verifybamid
[2024-02-24 17:25:27,198] multiqc [DEBUG ] No samples found: mirtrace
[2024-02-24 17:25:27,204] multiqc [DEBUG ] No samples found: happy
[2024-02-24 17:25:27,210] multiqc [DEBUG ] No samples found: mirtop
[2024-02-24 17:25:27,219] multiqc [DEBUG ] No samples found: homer
[2024-02-24 17:25:27,226] multiqc [DEBUG ] No samples found: macs2
[2024-02-24 17:25:27,231] multiqc [DEBUG ] No samples found: theta2
[2024-02-24 17:25:27,238] multiqc [DEBUG ] No samples found: snpeff
[2024-02-24 17:25:27,248] multiqc [DEBUG ] No samples found: gatk
[2024-02-24 17:25:27,254] multiqc [DEBUG ] No samples found: htseq
[2024-02-24 17:25:27,260] multiqc [DEBUG ] No samples found: bcftools
[2024-02-24 17:25:27,267] multiqc [DEBUG ] No samples found: featureCounts
[2024-02-24 17:25:27,275] multiqc [DEBUG ] No samples found: fgbio
[2024-02-24 17:25:27,294] multiqc [DEBUG ] No samples found: dragen
[2024-02-24 17:25:27,300] multiqc [DEBUG ] No samples found: dedup
[2024-02-24 17:25:27,306] multiqc [DEBUG ] No samples found: damageprofiler
[2024-02-24 17:25:27,342] multiqc [DEBUG ] No samples found: biobambam2
[2024-02-24 17:25:27,347] multiqc [DEBUG ] No samples found: mtnucratio
[2024-02-24 17:25:27,350] multiqc [DEBUG ] No samples found: picard
[2024-02-24 17:25:27,356] multiqc [DEBUG ] No samples found: prokka
[2024-02-24 17:25:27,362] multiqc [DEBUG ] No samples found: samblaster
[2024-02-24 17:25:27,374] multiqc [DEBUG ] No samples found: samtools
[2024-02-24 17:25:27,380] multiqc [DEBUG ] No samples found: sexdeterrmine
[2024-02-24 17:25:27,387] multiqc [DEBUG ] No samples found: bamtools
[2024-02-24 17:25:27,393] multiqc [DEBUG ] No samples found: jellyfish
[2024-02-24 17:25:27,404] multiqc [DEBUG ] No samples found: vcftools
[2024-02-24 17:25:27,410] multiqc [DEBUG ] No samples found: longranger
[2024-02-24 17:25:27,416] multiqc [DEBUG ] No samples found: stacks
[2024-02-24 17:25:27,422] multiqc [DEBUG ] No samples found: varscan2
[2024-02-24 17:25:27,443] multiqc [DEBUG ] No samples found: bbmap
[2024-02-24 17:25:27,449] multiqc [DEBUG ] No samples found: bismark
[2024-02-24 17:25:27,456] multiqc [DEBUG ] No samples found: biscuit
[2024-02-24 17:25:27,462] multiqc [DEBUG ] No samples found: hicexplorer
[2024-02-24 17:25:27,468] multiqc [DEBUG ] No samples found: hicup
[2024-02-24 17:25:27,474] multiqc [DEBUG ] No samples found: hicpro
[2024-02-24 17:25:27,480] multiqc [DEBUG ] No samples found: salmon
[2024-02-24 17:25:27,486] multiqc [DEBUG ] No samples found: kallisto
[2024-02-24 17:25:27,492] multiqc [DEBUG ] No samples found: slamdunk
[2024-02-24 17:25:27,498] multiqc [DEBUG ] No samples found: star
[2024-02-24 17:25:27,504] multiqc [DEBUG ] No samples found: hisat2
[2024-02-24 17:25:27,510] multiqc [DEBUG ] No samples found: tophat
[2024-02-24 17:25:27,516] multiqc [DEBUG ] No samples found: bowtie2
[2024-02-24 17:25:27,522] multiqc [DEBUG ] No samples found: bowtie1
[2024-02-24 17:25:27,529] multiqc [DEBUG ] No samples found: snpsplit
[2024-02-24 17:25:27,534] multiqc [DEBUG ] No samples found: kat
[2024-02-24 17:25:27,539] multiqc [DEBUG ] No samples found: leehom
[2024-02-24 17:25:27,546] multiqc [DEBUG ] No samples found: adapterRemoval
[2024-02-24 17:25:27,552] multiqc [DEBUG ] No samples found: clipandmerge
[2024-02-24 17:25:27,558] multiqc [DEBUG ] No samples found: cutadapt
[2024-02-24 17:25:27,564] multiqc [DEBUG ] No samples found: flexbar
[2024-02-24 17:25:27,570] multiqc [DEBUG ] No samples found: kaiju
[2024-02-24 17:25:27,575] multiqc [DEBUG ] No samples found: kraken
[2024-02-24 17:25:27,582] multiqc [DEBUG ] No samples found: malt
[2024-02-24 17:25:27,588] multiqc [DEBUG ] No samples found: trimmomatic
[2024-02-24 17:25:27,594] multiqc [DEBUG ] No samples found: sickle
[2024-02-24 17:25:27,600] multiqc [DEBUG ] No samples found: skewer
[2024-02-24 17:25:27,606] multiqc [DEBUG ] No samples found: sortmerna
[2024-02-24 17:25:27,612] multiqc [DEBUG ] No samples found: biobloomtools
[2024-02-24 17:25:27,618] multiqc [DEBUG ] No samples found: fastq_screen
[2024-02-24 17:25:27,625] multiqc [DEBUG ] No samples found: afterqc
[2024-02-24 17:25:27,631] multiqc [DEBUG ] No samples found: fastp
[2024-02-24 17:25:32,629] multiqc.modules.fastqc.fastqc [INFO ] Found 50 reports
[2024-02-24 17:25:32,994] multiqc [DEBUG ] No samples found: pycoqc
[2024-02-24 17:25:33,000] multiqc [DEBUG ] No samples found: minionqc
[2024-02-24 17:25:33,007] multiqc [DEBUG ] No samples found: multivcfanalyzer
[2024-02-24 17:25:33,014] multiqc [DEBUG ] No samples found: clusterflow
[2024-02-24 17:25:33,020] multiqc [DEBUG ] No samples found: bcl2fastq
[2024-02-24 17:25:33,028] multiqc [DEBUG ] No samples found: interop
[2024-02-24 17:25:33,034] multiqc [DEBUG ] No samples found: ivar
[2024-02-24 17:25:33,041] multiqc [DEBUG ] No samples found: flash
[2024-02-24 17:25:33,048] multiqc [DEBUG ] No samples found: seqyclean
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'.
[2024-02-24 17:25:33,049] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'.
[2024-02-24 17:25:33,108] multiqc [INFO ] Compressing plot data
[2024-02-24 17:25:33,943] multiqc [INFO ] Report : multiqc_report.html
[2024-02-24 17:25:33,944] multiqc [INFO ] Data : multiqc_data
[2024-02-24 17:25:33,944] multiqc [DEBUG ] Moving data file from '/state/partition1/job-43349783/tmpl8_3jeam/multiqc_data' to '/vast/gencore/GENEFLOW/work/7d/ccca72fe3f428c0ba019bd71d46f32/2/multiqc_data'
[2024-02-24 17:25:34,151] multiqc [INFO ] MultiQC complete