FastQCFastQC Report
Sat 24 Feb 2024
HTG72DMXY_l01_n02_K562_4sU_200_06h_2_240214.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTG72DMXY_l01_n02_K562_4sU_200_06h_2_240214.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64256262
Sequences flagged as poor quality0
Sequence length151
%GC68

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG808970.1258974572781716No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)