Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HTFHVBGXG_n01_10X_CD8_v3_1_1_GEX_1 HTFHVBGXG_n01_10X_CD8_v3_1_1_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 38863819.0 0.0 26.0 49.0 88.26221719369835 26.0 pass pass pass pass warn pass pass pass pass pass pass HTFHVBGXG_n01_10X_CD8_v3_1_1_GEX_2 HTFHVBGXG_n01_10X_CD8_v3_1_1_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 53439729.0 0.0 26.0 49.0 85.566691854564 26.0 pass pass pass pass warn pass pass pass pass pass pass HTFHVBGXG_n01_10X_CD8_v3_1_1_ORF_1 HTFHVBGXG_n01_10X_CD8_v3_1_1_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 20329018.0 0.0 26.0 49.0 34.55482532045158 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_10X_CD8_v3_1_1_ORF_2 HTFHVBGXG_n01_10X_CD8_v3_1_1_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 18216765.0 0.0 26.0 49.0 35.57983724050567 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_10X_CD8_v3_1_1_TCR_1 HTFHVBGXG_n01_10X_CD8_v3_1_1_TCR_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 30551541.0 0.0 26.0 49.0 12.792950251857821 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_10X_CD8_v3_1_1_TCR_2 HTFHVBGXG_n01_10X_CD8_v3_1_1_TCR_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 21407990.0 0.0 26.0 49.0 13.801788986886374 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_10X_CD8_v3_1_3_GEX_1 HTFHVBGXG_n01_10X_CD8_v3_1_3_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 40496375.0 0.0 26.0 49.0 86.78445138676119 26.0 pass pass pass pass warn pass pass pass pass pass pass HTFHVBGXG_n01_10X_CD8_v3_1_3_GEX_2 HTFHVBGXG_n01_10X_CD8_v3_1_3_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 44743331.0 0.0 26.0 49.0 85.80813276998917 26.0 pass pass pass pass warn pass pass pass pass pass pass HTFHVBGXG_n01_10X_CD8_v3_1_3_ORF_1 HTFHVBGXG_n01_10X_CD8_v3_1_3_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 17108441.0 0.0 26.0 48.0 33.44758724928214 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_10X_CD8_v3_1_3_ORF_2 HTFHVBGXG_n01_10X_CD8_v3_1_3_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 19484940.0 0.0 26.0 48.0 32.026041114799156 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_10X_CD8_v3_1_3_TCR_1 HTFHVBGXG_n01_10X_CD8_v3_1_3_TCR_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 26409678.0 0.0 26.0 49.0 13.150562053856273 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_10X_CD8_v3_1_3_TCR_2 HTFHVBGXG_n01_10X_CD8_v3_1_3_TCR_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 22248825.0 0.0 26.0 49.0 13.4861042630317 26.0 pass pass pass pass warn pass pass pass fail pass pass HTFHVBGXG_n01_undetermined HTFHVBGXG_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 31348395.0 0.0 26.0 46.0 32.68263172813196 26.0 pass pass pass pass pass pass pass pass fail warn pass HTFHVBGXG_n02_10X_CD8_v3_1_1_GEX_1 HTFHVBGXG_n02_10X_CD8_v3_1_1_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 38863819.0 0.0 132.0 50.0 27.41398838656422 132.0 pass pass pass pass warn pass pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_1_GEX_2 HTFHVBGXG_n02_10X_CD8_v3_1_1_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 53439729.0 0.0 132.0 50.0 25.727336647064437 132.0 pass pass pass pass warn pass pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_1_ORF_1 HTFHVBGXG_n02_10X_CD8_v3_1_1_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 20329018.0 0.0 132.0 52.0 34.884540708914095 132.0 pass pass pass pass warn warn pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_1_ORF_2 HTFHVBGXG_n02_10X_CD8_v3_1_1_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 18216765.0 0.0 132.0 52.0 35.57553064114821 132.0 pass pass pass pass warn warn pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_1_TCR_1 HTFHVBGXG_n02_10X_CD8_v3_1_1_TCR_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 30551541.0 0.0 132.0 52.0 12.33163385348457 132.0 pass pass pass pass warn warn pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_1_TCR_2 HTFHVBGXG_n02_10X_CD8_v3_1_1_TCR_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 21407990.0 0.0 132.0 52.0 12.91696293526007 132.0 pass pass pass pass warn warn pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_3_GEX_1 HTFHVBGXG_n02_10X_CD8_v3_1_3_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 40496375.0 0.0 132.0 51.0 26.583122876480843 132.0 pass pass pass pass warn pass pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_3_GEX_2 HTFHVBGXG_n02_10X_CD8_v3_1_3_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 44743331.0 0.0 132.0 51.0 26.012233498360644 132.0 pass pass pass pass warn pass pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_3_ORF_1 HTFHVBGXG_n02_10X_CD8_v3_1_3_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 17108441.0 0.0 132.0 53.0 32.90975015975518 132.0 pass pass pass pass warn pass pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_3_ORF_2 HTFHVBGXG_n02_10X_CD8_v3_1_3_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 19484940.0 0.0 132.0 53.0 32.226621402444536 132.0 pass pass pass pass warn pass pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_3_TCR_1 HTFHVBGXG_n02_10X_CD8_v3_1_3_TCR_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 26409678.0 0.0 132.0 52.0 13.578156216935982 132.0 pass pass pass pass fail warn pass pass fail fail pass HTFHVBGXG_n02_10X_CD8_v3_1_3_TCR_2 HTFHVBGXG_n02_10X_CD8_v3_1_3_TCR_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 22248825.0 0.0 132.0 52.0 13.692552270935323 132.0 pass pass pass pass fail warn pass pass fail fail pass HTFHVBGXG_n02_undetermined HTFHVBGXG_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 31348395.0 0.0 132.0 48.0 18.542130002710024 132.0 pass pass pass pass pass fail pass pass fail fail pass