HTFH3AFXY_n02_vk3-7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTFH3AFXY_n02_vk3-7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8769361
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25892	0.295255264323136	No Hit
TGGGGTGGTATAGTCCGCATTGGGATGTTACTTTCCTGTTATGGCATGGA	10168	0.11594915524631726	No Hit
CGGGAAGAGATTTAGTATGTGGGACAGAATGTCGGCGGCAGTATTGAGAC	8777	0.10008711010984722	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGAGATC	5040	38.61115	5
CCGTATC	40565	34.864708	55
CGTATCA	41155	34.739067	56
CGCCGTA	42965	34.17164	53
CATTAAA	42510	34.002247	61
GCCGTAT	45095	33.87697	54
GTATCAT	40820	33.72094	57
TCGCCGT	43435	33.608494	52
TCATTAA	42420	33.52161	60
GTCGCCG	45150	33.38611	51
GGTCGCC	45865	33.262447	50
ATCATTA	43315	32.602726	59
TGGTCGC	46430	32.42048	49
TATCATT	43910	32.04936	58
CTCGGTG	41590	32.028088	44
TCTCGGT	42080	31.62187	43
ATCTCGG	42340	31.52688	42
GATCTCG	40745	31.524117	41
GTGGTCG	48980	31.097021	48
AGATCTC	41800	30.946165	40