HTC23BCXX_l02n02_kb_plate8_44.35200000060aad.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTC23BCXX_l02n02_kb_plate8_44.35200000060aad.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	35287
Sequences flagged as poor quality	0
Sequence length	33
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGAATGGGCAGAGTGGCAAAAAAAAAAAAAAA	85	0.24088191118542238	No Hit
GGCTAAACGTACTCAAAAAAAAAAAAAAAAAAA	55	0.15586476606115565	No Hit
ACGCAGAGTGAATGGGCAGAGTGGCAAAAAAAA	53	0.15019695638620456	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCC	50	0.14169524187377788	No Hit
TATCAACGCAGAGTGAATGGGCAGAGTGGCAAA	49	0.13886133703630232	No Hit
GTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	46	0.13035962252387565	No Hit
TATCAACGCAGAGTGAATGGGCTAAACGTACTC	41	0.11619009833649786	No Hit
AACGTACTCTGCGTAAAAAAAAAAAAAAAAAAA	39	0.11052228866154673	No Hit
GTGAATGGGCAGAGTGGAAAAAAAAAAAAAAAA	37	0.10485447898659563	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCATC	40	1.7824528E-5	23.634958	2
ATCATCG	40	1.7824528E-5	23.634958	3
TCATCGC	45	4.4274475E-5	21.00885	4
GTATCAT	50	9.95712E-5	18.907967	1
CATCGCA	50	1.00668745E-4	18.881107	5
GTTGATA	65	1.835142E-6	18.700186	27
ATCGCAG	55	2.0890178E-4	17.164642	6
TATCAAC	130	7.2759576E-12	16.622387	1
GTATCAA	50	0.0021837046	16.20683	1
TCTGCGT	700	0.0	16.01389	27
TCGCAGA	60	4.0565958E-4	15.734258	7
ATCAACG	150	8.185452E-11	14.406071	2
CGCCAGA	80	2.3052655E-4	13.4865055	6
AACAGAG	85	3.8498716E-4	12.693182	7
TCAACGC	150	1.8804712E-8	12.605311	3
CGTTGAT	120	3.369847E-6	12.380216	27
CTCTGCG	955	0.0	11.737929	26
CTCAGAG	95	9.811425E-4	11.357057	7
GCCAGAG	165	9.089017E-7	10.625731	7
TGCGTTG	230	5.4023985E-10	10.569671	27