HTC23BCXX_l02n02_kb_plate6_55.3520000005f404.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTC23BCXX_l02n02_kb_plate6_55.3520000005f404.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	46808
Sequences flagged as poor quality	0
Sequence length	33
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCATTGCTGAAGACGTACTCTGCGTTGATACCA	340	0.7263715604170228	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCC	145	0.30977610664843613	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	139	0.29695778499401815	No Hit
TATCAACGCAGAGTGAATGGGCATTGCTGAAGA	132	0.28200307639719707	No Hit
GCTGAAGACGTACTCAAAAAAAAAAAAAAAAAA	131	0.27986668945479404	No Hit
GTATCAACGCAGAGTGAATGGGCATTGCTGAAG	105	0.22432062895231583	No Hit
GTGAATGGGCATTGCTGAAGAAAAAAAAAAAAA	96	0.20509314647068877	No Hit
GTGAATGGGCATTGCTGAAAAAAAAAAAAAAAA	86	0.1837292770466587	No Hit
GCTGAAGACGTACAAAAAAAAAAAAAAAAAAAA	79	0.16877456844983765	No Hit
ACCTATACCCGGCCGTCGGGGCAAGAGCCAGGC	71	0.15168347291061357	No Hit
ACGCAGAGTGAATGGGCATTGCTGAAGAAAAAA	62	0.13245599042898648	No Hit
GGCTAAATACGGGCGAGAGACCGATAGCGAACA	61	0.1303196034865835	No Hit
ACGCAGAGTGAATGGGCATTGCTGAAAAAAAAA	58	0.12391044265937447	No Hit
GCTAAATACGGGCGAGAGACCGATAGCGAACAA	54	0.11536489488976243	No Hit
TATCAACGCAGAGTGAATGGGAAGCAGTGGTAT	54	0.11536489488976243	No Hit
GTTTGGGAATGCAGCCCCAATCGGGCGGTAAAT	53	0.11322850794735942	No Hit
TATCAACGCAGAGTGAATGGGCATTGCTGAAAA	52	0.11109212100495641	No Hit
GAGTGAATGGGCATTGCTGAAGAAAAAAAAAAA	51	0.10895573406255342	No Hit
ACGCAGAGTGAATGGGCATTGCTGAAGACGTAC	50	0.10681934712015041	No Hit
CCGCATTGCTGAAGACGTACTCTGCGTTGATAC	50	0.10681934712015041	No Hit
AACAAGTACCGCGAGGTAAAAAAAAAAAAAAAA	50	0.10681934712015041	No Hit
GTGAATGGGAAGCAGTGGTATCAAAAAAAAAAA	50	0.10681934712015041	No Hit
GCTGAAGACAAAAAAAAAAAAAAAAAAAAAAAA	48	0.10254657323534438	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTTGTT	20	0.00852763	27.0	13
GGGTTGT	20	0.00852763	27.0	12
AGGGCAT	20	0.00852763	27.0	6
CGGGTTG	20	0.00852763	27.0	11
TCGGGTT	20	0.00852763	27.0	10
GATACCA	45	4.4825752E-5	21.0	27
TGATACC	45	4.4825752E-5	21.0	26
AGGCATT	45	4.4825752E-5	21.0	7
CGCGCAT	40	4.9290154E-4	20.25	6
CTACGAG	35	0.005455489	19.285713	3
GTCGGGG	35	0.005455489	19.285713	15
GCGCATT	95	2.4770998E-7	15.631579	7
TCTGCGT	885	0.0	15.40678	27
GTATCAA	150	1.3315002E-9	13.500001	1
AAGCATT	90	4.1016843E-5	13.5	7
CTCTGCG	1035	0.0	13.173913	26
CTGCATT	105	1.2069802E-5	12.857142	7
TATCAAC	160	3.4906407E-9	12.65625	1
ACTCTGC	1150	0.0	11.856522	25
ATCAACG	160	4.8046786E-8	11.8125	2