HTC23BCXX_l02n02_kb_plate4_46.3520000005dadb.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTC23BCXX_l02n02_kb_plate4_46.3520000005dadb.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	46150
Sequences flagged as poor quality	0
Sequence length	33
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCTTGCAGTAACGTACTCTGCGTTGATACCAC	317	0.6868905742145178	No Hit
GTACGTTACTGCAAAAAAAAAAAAAAAAAAAAA	291	0.6305525460455038	No Hit
GAGTACGTTACTGCAAAAAAAAAAAAAAAAAAA	209	0.4528710725893824	No Hit
CCTCCTTGCAGTAACGTACTCTGCGTTGATACC	136	0.29469122426868904	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	109	0.2361863488624052	No Hit
GTGAATGGGGAGTACGTTACTGCAAAAAAAAAA	108	0.2340195016251354	No Hit
CTCCTTGCAGTAACGTACTCTGCGTTGATACCA	83	0.17984832069339113	No Hit
GTGAATGGGGTACGTTACTGCAAAAAAAAAAAA	74	0.16034669555796316	No Hit
GAGTGAATGGGGTACGTTACTGCAAAAAAAAAA	70	0.15167930660888407	No Hit
GTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAA	66	0.14301191765980498	No Hit
GTGAATGGGAGTACGTTACTGCAAAAAAAAAAA	66	0.14301191765980498	No Hit
GGGTACGTTACTGCAAAAAAAAAAAAAAAAAAA	57	0.12351029252437704	No Hit
ACGCAGAGTGAATGGGGAGTACGTTACTGCAAA	55	0.11917659804983748	No Hit
TATCAACGCAGAGTGAATGGGAAGCAGTGGTAT	55	0.11917659804983748	No Hit
GCTCCTTGCAGTAACGTACTCTGCGTTGATACC	55	0.11917659804983748	No Hit
GTGAATGGGTACGTTACTGCAAAAAAAAAAAAA	55	0.11917659804983748	No Hit
ACGCAGAGTGAATGGGGTACGTTACTGCAAAAA	54	0.1170097508125677	No Hit
GTATCAACGCAGAGTGAATGGGAAGCAGTGGTA	54	0.1170097508125677	No Hit
CTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	53	0.11484290357529794	No Hit
ACGTTACTGCAAAAAAAAAAAAAAAAAAAAAAA	52	0.11267605633802817	No Hit
ACGCAGAGTGAATGGGAAGCAGTGGTATCAAAA	47	0.10184182015167932	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTCCTC	20	0.008526512	27.0	5
TCACCTC	25	7.713884E-4	26.999998	5
ATACCAC	55	3.7567042E-7	22.09091	27
GTCCTCC	45	4.4809647E-5	21.000002	6
CATCTCC	40	4.927691E-4	20.25	6
AAACTCC	35	0.0054544453	19.285713	6
ATCTCCT	80	3.4819095E-8	18.5625	7
TGCGTTG	380	0.0	17.763159	27
CCTCTCC	80	1.3489727E-5	15.1875	6
TCTGCGT	1475	0.0	15.010169	27
CTCTCCT	105	7.6907054E-7	14.142857	7
TCTCCTT	375	0.0	14.040001	8
AACTCCT	120	2.3199391E-7	13.500001	7
GATACCA	80	2.3103E-4	13.5	26
TGGGGAG	100	7.29181E-6	13.499999	6
GTATCAA	280	0.0	13.017856	1
GTTGATA	85	3.8580433E-4	12.705883	23
CGTTGAT	85	3.8580433E-4	12.705883	22
GCAAGGA	75	0.0021953925	12.599999	13
TGCAAGG	75	0.0021953925	12.599999	12