HTC23BCXX_l02n01_kb_plate7_32.3510000005fd28.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTC23BCXX_l02n01_kb_plate7_32.3510000005fd28.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3947
Sequences flagged as poor quality	0
Sequence length	27
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGATAGTTAGCCCTGTCTCTTATACAC	25	0.6333924499619965	No Hit
GGATAGTTAGCCCTGTCTCTTCTACAC	12	0.3040283759817583	No Hit
GGATAGTTAGCCTGTCTCTTATACACA	11	0.2786926779832784	No Hit
GGATAGTTAGCCGGGGGGGCTTTTTTT	6	0.15201418799087915	No Hit
GGATAGTTAGCTGTCTCTTATACACAT	6	0.15201418799087915	No Hit
GGATAGTTAGCCGGCTGTCTCTTATAC	5	0.12667848999239928	No Hit
GGATAGTTAGCCGGGGGGGGTTTTTTT	4	0.10134279199391943	No Hit
GGATAGTTAGCCCCTGTCTCTTATACA	4	0.10134279199391943	No Hit
GGATAGTTAGCCGTAGGGGGTTTTTTT	4	0.10134279199391943	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGTT	35	2.4877145E-5	21.72	2
GGATCGT	35	2.4877145E-5	21.72	1
GGATAGT	300	0.0	21.72	1
ATAGTTA	300	0.0	21.72	3
ATCGTTA	35	2.4877145E-5	21.72	3
GATAGTT	300	0.0	21.72	2
TAGCCGT	30	3.166598E-4	20.884617	8
TAGCCGG	60	4.3473847E-10	20.884617	8
TAGCCGC	30	3.166598E-4	20.884617	8
TAGCCCT	30	3.166598E-4	20.884617	8
TAGCCCA	30	3.166598E-4	20.884617	8
TAGCCAG	30	3.166598E-4	20.884617	8
TAGCCAA	30	3.166598E-4	20.884617	8
CATTTTT	30	3.166598E-4	20.884617	19
TATTTTT	30	3.166598E-4	20.884617	19
GATTTTT	30	3.166598E-4	20.884617	19
GTTAGCC	390	0.0	20.884617	6
TAGCCTT	25	0.002911953	20.884615	8
TAGCCGA	25	0.002911953	20.884615	8
TAGTTAG	345	0.0	20.884615	4