HTC23BCXX_l01n02_kb_plate3_47.3520000005d06b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTC23BCXX_l01n02_kb_plate3_47.3520000005d06b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17287
Sequences flagged as poor quality	0
Sequence length	33
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTACGTTAGCAAAAAAAAAAAAAAAAAAAAA	54	0.31237345982530224	No Hit
GTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAA	45	0.26031121652108524	No Hit
CCTCCAGTCTGCTAACGTACTCTGCGTTGATAC	44	0.2545265228206166	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	41	0.23717244171921098	No Hit
GTCCAGTCTGCTAACGTACTCTGCGTTGATACC	35	0.2024642795163996	No Hit
GTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	29	0.16775611731358825	No Hit
CTCCAGTCTGCTAACGTACTCTGCGTTGATACC	24	0.13883264881124543	No Hit
GCTCCAGTCTGCTAACGTACTCTGCGTTGATAC	23	0.13304795511077688	No Hit
GCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAA	19	0.10990918030890265	No Hit
AAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAA	18	0.10412448660843407	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTCCAG	55	0.0040782304	14.695653	7
TTGATAC	60	0.007125684	13.510175	27
TCTGCGT	515	0.0	13.379008	27
TGCGTTG	155	1.7680577E-9	13.074362	27
CTTCCAG	75	0.0021342132	12.572947	7
CTGCGTT	265	3.6379788E-12	10.706176	27
CTCTGCG	665	0.0	10.564346	26
TGAATGG	170	1.163553E-6	10.33131	2
ATCCAGT	200	8.0914106E-8	10.103261	8
GTGAATG	175	1.6891663E-6	10.03613	1
ACTCTGC	705	0.0	9.9649515	25
GTACTCT	755	0.0	9.662907	23
TACTCTG	745	0.0	9.611265	24
CGTACTC	775	0.0	9.41354	22
ACGTACT	780	0.0	9.353198	21
GAATGGG	190	4.8373768E-6	9.243804	3
AACGTAC	790	0.0	9.234802	20
TAACGTA	795	0.0	9.176723	19
CTAACGT	800	0.0	9.119368	18
GCTAACG	795	0.0	8.836844	17