FastQCFastQC Report
Thu 19 Sep 2019
HT5VLAFXY_n02_dDAP_HALObZIP53_GSTbZIP63_Col_B_k-b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5VLAFXY_n02_dDAP_HALObZIP53_GSTbZIP63_Col_B_k-b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10684175
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCCGC6502.3782824E-57.539483517
CCCGCGT8805.048205E-77.15888862
CCCGCGA9609.807406E-55.83420619
GCCCGCG11506.4095348E-65.782661461
CGGGCAG8507.82643E-45.765189653
CGCGTCG15805.576294E-85.537765564
AGCCCGC10808.9588284E-55.509334660
CCGCGTC16653.0191586E-85.465284363
CCCGCGC12201.7319091E-55.45051165
TGTAGCC65950.05.30709961
GGGGCCT8600.00561159855.29111747
GCCGCCC8650.00600834565.26038515
GGTGTAG72200.05.186930759
GTGTAGC70500.05.11354560
ACGCGGG13752.303378E-55.0914322
CCGCGCT11753.1731342E-45.063306366
Produced by FastQC (version 0.11.5)