HT5VLAFXY_n01_wg_dDAP_HALOLHY1_GSTCCA1_Col_B

Basic Statistics

Measure	Value
Filename	HT5VLAFXY_n01_wg_dDAP_HALOLHY1_GSTCCA1_Col_B_k.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22457444
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT	511399	2.277191473793723	TruSeq Adapter, Index 27 (97% over 39bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	161208	0.7178377022781399	No Hit
CGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTATGCC	152559	0.6793248599439901	TruSeq Adapter, Index 27 (97% over 36bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTA	61185	0.2724486366302416	TruSeq Adapter, Index 27 (97% over 39bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGAGCTCGTAT	24293	0.10817348581610624	TruSeq Adapter, Index 27 (97% over 39bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	12895	46.649956	1
GCCGTCT	88485	45.804016	51
TGCCGTC	91155	45.64882	50
ATGCCGT	91860	45.43945	49
TATGCCG	92555	45.264626	48
GTATGCC	93930	44.680267	47
CCGTCTT	91495	44.33541	52
CGTATGC	94970	44.11727	46
CTGCTTG	88205	44.009556	59
CGTCTTC	93235	43.294025	53
CTTCTGC	92150	42.766895	56
TCGTATG	97465	42.53904	45
CTCGTAT	94040	41.959476	44
GCTTGAA	94795	41.93599	61
TGCTTGA	93495	41.66182	60
TTCTGCT	92420	41.468433	57
TCTGCTT	94640	41.18727	58
TCTCGTA	94865	39.79782	43
AAGGGGG	8820	39.761597	70
TCTTCTG	100660	39.255608	55