HT5VLAFXY_n01_wg_dDAP_HALOLHY1_GSTCCA1_Col_B

Basic Statistics

Measure	Value
Filename	HT5VLAFXY_n01_wg_dDAP_HALOLHY1_GSTCCA1_Col_B_k-b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22457444
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT	511399	2.277191473793723	TruSeq Adapter, Index 27 (97% over 39bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	161208	0.7178377022781399	No Hit
CGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTATGCC	152559	0.6793248599439901	TruSeq Adapter, Index 27 (97% over 36bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTA	61185	0.2724486366302416	TruSeq Adapter, Index 27 (97% over 39bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGAGCTCGTAT	24293	0.10817348581610624	TruSeq Adapter, Index 27 (97% over 39bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	13025	46.480885	1
GCCGTCT	88215	45.971985	51
TGCCGTC	90885	45.81524	50
ATGCCGT	91705	45.577312	49
TATGCCG	92260	45.462467	48
GTATGCC	93580	44.888515	47
CCGTCTT	91115	44.524155	52
CGTATGC	94760	44.27045	46
CTGCTTG	88000	44.171642	59
CGTCTTC	92835	43.46926	53
CTTCTGC	91755	42.928116	56
TCGTATG	97190	42.67021	45
CTCGTAT	93570	42.069244	44
GCTTGAA	94780	42.020084	61
TGCTTGA	93410	41.75584	60
TTCTGCT	92275	41.594196	57
TCTGCTT	94455	41.316017	58
TCTCGTA	94395	39.810593	43
AAGGGGG	8705	39.7642	70
TCTTCTG	100365	39.346577	55