FastQCFastQC Report
Thu 19 Sep 2019
HT5VLAFXY_n01_dDAP_HALObZIP53_GSTbZIP63_Col_B_k-b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5VLAFXY_n01_dDAP_HALObZIP53_GSTbZIP63_Col_B_k-b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10684175
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGGG11150.08.47527642
CGGGGGT7956.193359E-67.04397544
GCGGGGG8150.00298042275.582782352
TCGGGGG14251.3729295E-65.403470543
ACTCCGG39150.05.27454870
CACTCCG38650.05.25222770
Produced by FastQC (version 0.11.5)