HT5VLAFXY_n01_bZIP53_Col_B_k-b.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HT5VLAFXY_n01_bZIP53_Col_B_k-b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11206507
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGGG	1725	0.0	9.739073	42
CGGGGGG	1110	0.0	8.828776	44
TCCGGAG	6800	0.0	7.3602505	70
TCGGGGG	1775	0.0	6.901368	43
ACTCCGG	7590	0.0	6.732503	70
CACTCCG	8235	0.0	6.630198	70
GGCAGCG	1330	1.2405508E-9	6.581639	1
CTCCGGA	8340	0.0	5.9591975	69
AATCGGG	3040	0.0	5.756545	41
CCGGAGA	7955	0.0	5.5876474	69
CGGAGAA	7930	0.0	5.561127	70
CGCCCCG	820	0.003204341	5.548748	70
CGGGGGT	830	0.0036981646	5.4818954	70
TCCAGTC	16335	0.0	5.420843	70
CTCCAGT	16465	0.0	5.2930145	69
CAGTCAC	14420	0.0	5.2912307	70
CGCCCCC	880	0.007352223	5.170424	47