Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HT5N7DRX5_n01_undetermined HT5N7DRX5_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 48352050.0 0.0 28.0 47.0 52.38098224092466 28.0 pass pass pass pass pass pass pass pass warn pass pass HT5N7DRX5_n01_wy_flu1_10X HT5N7DRX5_n01_wy_flu1_10X.fastq.gz Conventional base calls Sanger / Illumina 1.9 820509729.0 0.0 28.0 49.0 40.86325549138509 28.0 pass pass pass pass pass pass pass pass fail pass pass HT5N7DRX5_n01_wy_flu1_dialout HT5N7DRX5_n01_wy_flu1_dialout.fastq.gz Conventional base calls Sanger / Illumina 1.9 3523940.0 0.0 28.0 49.0 3.5896222246978122 28.0 pass pass pass pass pass pass pass pass fail pass pass HT5N7DRX5_n02_undetermined HT5N7DRX5_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 48352050.0 0.0 90.0 43.0 13.986764864889544 90.0 pass pass pass pass warn fail pass pass fail warn pass HT5N7DRX5_n02_wy_flu1_10X HT5N7DRX5_n02_wy_flu1_10X.fastq.gz Conventional base calls Sanger / Illumina 1.9 820509729.0 0.0 90.0 41.0 9.193898211719144 90.0 pass pass pass pass fail fail pass pass fail warn pass HT5N7DRX5_n02_wy_flu1_dialout HT5N7DRX5_n02_wy_flu1_dialout.fastq.gz Conventional base calls Sanger / Illumina 1.9 3523940.0 0.0 90.0 39.0 7.165102731266662 90.0 pass pass pass pass fail fail pass pass fail warn pass