HT5LJBCXY_l02n02_inf_cell11.352000000950f5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HT5LJBCXY_l02n02_inf_cell11.352000000950f5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	222890
Sequences flagged as poor quality	0
Sequence length	51
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1145	0.5137063125308449	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	45	3.8198777E-10	44.998432	21
CTCGTAT	20	7.0222444E-4	44.99843	28
CTTTTGA	20	7.0222444E-4	44.99843	20
TATCTCG	20	7.0222444E-4	44.99843	25
TCAGCCG	20	7.0222444E-4	44.99843	29
CGGTATA	30	2.1581218E-6	44.99843	34
GTTATAC	35	1.206372E-7	44.99843	35
ACGGTGA	25	3.881457E-5	44.99843	34
ACGCGTC	45	1.913213E-8	40.00758	40
TACGCGT	40	3.4363984E-7	39.38246	39
TGTTATA	35	6.227143E-6	38.570084	34
GCTTACT	30	1.1357031E-4	37.507107	42
TCTGCAT	30	1.13720496E-4	37.49869	27
TCCGCCG	60	1.546141E-10	37.49869	29
CTGCGTT	30	1.13720496E-4	37.49869	28
TCTGTGT	30	1.13720496E-4	37.49869	27
CCGGTAT	30	1.13720496E-4	37.49869	33
TCCGGTA	30	1.13720496E-4	37.49869	32
CTGATCT	155	0.0	36.289055	23
GTCTACT	75	1.8189894E-12	36.006824	42