FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H7_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H7_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3749
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT140.37343291544411844No Hit
CTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACAC120.3200853560949587No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC120.3200853560949587No Hit
GTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAG90.240064017071219No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT70.18671645772205922No Hit
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA70.18671645772205922No Hit
ATTCTATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGC60.16004267804747935No Hit
TCCAAATACATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATT60.16004267804747935No Hit
GTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAA50.13336889837289945No Hit
GTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAAATGTGCAATA50.13336889837289945No Hit
CATAATAACACTCCATCAGTAGTTCTTTTGTCAAATGCATATGAGAAAAG50.13336889837289945No Hit
CAATAATGGTCAACAGGAGATTGTACCCATGAAAAAGGAGCAGTCAGACA50.13336889837289945No Hit
AGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAGAACT50.13336889837289945No Hit
CCATTACACAAATCATTTGGCTGGGAATGGAACATTTACCATATGTATGA40.10669511869831955No Hit
GATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTTAGTCGAA40.10669511869831955No Hit
ACTTTACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAA40.10669511869831955No Hit
CTACTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTA40.10669511869831955No Hit
GTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTTAGTCGAAGAG40.10669511869831955No Hit
GGAATGTTGTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTT40.10669511869831955No Hit
CTAGTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAGTTTGG40.10669511869831955No Hit
CTGATGGAGTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCA40.10669511869831955No Hit
CCCATTTCCTTTGCTTGAACTCTCTGGCCTTTTCTCATATGCATTTGACA40.10669511869831955No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)