FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1294
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA30.23183925811437403No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTG30.23183925811437403No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG30.23183925811437403No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC30.23183925811437403No Hit
ATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTGCTGCAATGTATT30.23183925811437403No Hit
GGATGGACAAGTGGAAGCTTGTGTTCTGATTTGAAGATCATCTATGCAGG20.1545595054095827No Hit
AATCAAGCCAGTCCCATTTAGCATTTACTAGCTTACACAGAATCAACAAC20.1545595054095827No Hit
AGTCTGTTAAGTGTCTGCCTTCGGCTCAGGTCATGATTCCAAAGTCCCTG20.1545595054095827No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA20.1545595054095827No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTC20.1545595054095827No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG20.1545595054095827No Hit
TGCTGAGACAGTGATCCGGGCTAGCGAGAAAGATTTGAAAGTCAAGAGCA20.1545595054095827No Hit
CCCCCAGAGCACCTGGGTGGCTCAGCTGGTTGGACTCAAGTCATGATTTC20.1545595054095827No Hit
CATCCGAATTCTTTTGATCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGT20.1545595054095827No Hit
ACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTT20.1545595054095827No Hit
GTTCTTCAATGGTGGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTC20.1545595054095827No Hit
GTTCCTTACGCCTTTAGAATAGTGATATTAGGGCTGTCTCTTATACACAT20.1545595054095827No Hit
CAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAA20.1545595054095827No Hit
GGAGAGAGGGAGGCACGCTTCCTGCTAAACAAGGACCCTGATTCGGGGCT20.1545595054095827No Hit
GGGTAAAGCTGGAATCAACAAGGATTTACCAGATTTTGGCGATCTATTCA20.1545595054095827No Hit
ATTCAGCATGACCTTTTGTCACTAGCCTCCTCTTCCCCTGTCTCTTATAC20.1545595054095827No Hit
ACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCA20.1545595054095827No Hit
GTTTGCTCATGAGTGTCTCCAAGATGCATATCCTGTCTCTTATACACATC20.1545595054095827No Hit
ATGTAATGCAACAACATTTTTAGTGAAAACAAAACATAACTCGAACATCG20.1545595054095827No Hit
GCTCGGTTGTTAGACTCAGGTCATGTTGGCTCAGGTCATGATCTGTCTCT20.1545595054095827No Hit
AGGTAAGACAATGACAGGAGCTGAAGTAAGTTCAAAGGCTACTGTAAAGA20.1545595054095827No Hit
TCTCTAAACTTCCCTATGATGTCAACATCCTTTGAATCTGTCTCTTATAC20.1545595054095827No Hit
AGTCAACAAAGAGCATTACCTCATCCCCAGTTTCAGTCAATAACCAACCC20.1545595054095827No Hit
ATATTCAACTGTCTCTCCTTTGACCGATGTTCGAGTTATGTCTGTCTCTT20.1545595054095827No Hit
CCATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACTCTGT20.1545595054095827No Hit
GTTGAATACATTGCAGCAAACTTGTTAGTTTCGATTTTCGGATCTTCCCC20.1545595054095827No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACCTGTCTCT20.1545595054095827No Hit
GTGTAATGGATGGCTGAGTTCTCAAAGGGACTGTTAGCACGGTGGAATAG20.1545595054095827No Hit
TACACTCAGCAAGTGAAAGATGCAAATCCTAACCATACACCTGTCTCTTA20.1545595054095827No Hit
CTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTTCGACTAACTAGAATT20.1545595054095827No Hit
TTCAAGATCCATTCCACGATTTGTTTCCCAACAAGAGTGGCTGTTTCGAT20.1545595054095827No Hit
CATGAAAAGTGACACAAAACTTCTAAATGGTGGTACTTCGTTCATTCTCA20.1545595054095827No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT20.1545595054095827No Hit
ACATTCCACAGCAGGAGTTCAGATATGCTCATACCTTTAACCCCTAGGCC20.1545595054095827No Hit
CCATGAATGATGTCCAAGTCAGTAGTTCAAAGCTTACAGTGAGCGGCATT20.1545595054095827No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT20.1545595054095827No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA20.1545595054095827No Hit
TCTCAGTGGCATCCGGTGCCAAGTGTGAACAAGCGGTTATTTCAAACTGT20.1545595054095827No Hit
CTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCCTGTCT20.1545595054095827No Hit
CTGGGATAGAGCCTGGTGTCAGGCTCCCTGCTCAGTGGGGAATCTGCTTC20.1545595054095827No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)