FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H5_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H5_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11930
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT280.2347024308466052No Hit
CAATTATACCTAACCACAGACTGGAATTTCCTTAATAAAATGCATTGTTG260.21793797150041913No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG230.19279128248114No Hit
GTCCTAATTAAGAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGG190.1592623637887678No Hit
GGATAGGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTC180.15088013411567477No Hit
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA180.15088013411567477No Hit
GTATTTACATGTGTAATCACCTTCCAGATCATGATATAGAATACTTAAGT180.15088013411567477No Hit
ATTCTATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGC170.14249790444258173No Hit
CTCTTAATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTGTCTTCATA160.13411567476948869No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT150.12573344509639564No Hit
GTACAAATCAGCACAGAGTTTTCCAAGGATAGGACAGGGTTGGTTATTGA130.10896898575020957No Hit
CATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGGATCAGC130.10896898575020957No Hit
GTTGTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAG120.10058675607711651No Hit
GAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGGTACAAATCAGC120.10058675607711651No Hit
GCTTAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGC120.10058675607711651No Hit
AACCAACCCTGTCCTATCCTTGGAAAACTCTGTGCTGATTTGTACCATTA120.10058675607711651No Hit
TTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCATACACAGGCAG120.10058675607711651No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)