FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1314
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA40.30441400304414No Hit
GAGCGAAAGCAGGCAGAGAGGCAGGCAGAGAGAGAGCTGTCTCTTATACA20.15220700152207No Hit
GGTCATGATTCCAAAGTCCTGGGATCAAGCCCCGAATCAGGGTCCTTGTT20.15220700152207No Hit
GTGTTTAAGAACTTGGCTTCGCAGGCAATTACAGAATAAACCCTGCCCAG20.15220700152207No Hit
CCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGCTGTCTCTTATAC20.15220700152207No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG20.15220700152207No Hit
GAGGCAGGGGGAGAAGCAGGCTCCCCAACGAGCAAGGAGCGTGACACAGG20.15220700152207No Hit
CATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGA20.15220700152207No Hit
GGACCTGGGATCATGACCTGAGCTGAAGGCAGACACTTAACAACCTGTCT20.15220700152207No Hit
GGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACT20.15220700152207No Hit
ATTCTGTTATTGAAAAGATGAATACACAGTTCACAGCCTGTCTCTTATAC20.15220700152207No Hit
GATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA20.15220700152207No Hit
CCTAAATTCCGTATGGGAGCTTCCTGGTAACTCGTTCTGTTCCCTAATAC20.15220700152207No Hit
GATCATGACCTGAGGTGAAGGCAGACAATCGACTGAGCCACCTAGTTGCT20.15220700152207No Hit
GATCATGACCTGAGGTGAAGGCAGACAATCGACTGAGCCACCTAGTTGCC20.15220700152207No Hit
GATCTGGAAGGTGATTACACATGTAAATACTCATCTGCCTGTGTATGGTT20.15220700152207No Hit
GCAATATGCACACATTTGGAAGTTTACTGGCAAAATCTGTATTCAACAGT20.15220700152207No Hit
AAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGCTGTC20.15220700152207No Hit
ATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGTTCCTG20.15220700152207No Hit
CTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACC20.15220700152207No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCC20.15220700152207No Hit
ATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGGGACGTA20.15220700152207No Hit
ATCCATTCCACGATTTGTTTCCCAACAAGAGTGGCTGTTTCGATATCGAG20.15220700152207No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTCTGTCTCTTATA20.15220700152207No Hit
TGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCAATAGA20.15220700152207No Hit
CCGTAGTGCTAGCCAGCACCATTCTGTTTTCATGCCTGATTAGTGGATTG20.15220700152207No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC20.15220700152207No Hit
GCCATGGATACCATCTCTCTGCCTCTCCTGAAAGTGCTTCTAGACAATTC20.15220700152207No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCCTGTCTCTTATACACA20.15220700152207No Hit
GCCCCTCCCTTGCATGGACCATGGGCCCCCTAGCCTTGAACCCCAAGCTG20.15220700152207No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCC20.15220700152207No Hit
CGGTGGAATAGTAGGGCTTTATTAACTAGACTGTGTGCCTGTCTCTTATA20.15220700152207No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG20.15220700152207No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC20.15220700152207No Hit
CTTCTACCCCAAAAAGAGGAATCAAAGGAGTCAGAGTCACAACTGAAAAT20.15220700152207No Hit
CCATGACTCGGGCCATGTTAGCAAATTCCTGGCAACTCTGAAAATTCTCA20.15220700152207No Hit
CATCAAGAGACCTATCATTTGGTATAACTGGAATCCAGAAGGAAGGAAAG20.15220700152207No Hit
GGGTGTTAATCTCAGGTGGAATAGTTTGATGTTCAGATTGTCCTGGAGCT20.15220700152207No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)