FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H3_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H3_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5521
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATG100.18112660749864154No Hit
CCTATGAACCATGTTTAAGCATTTCACCCTCCAGAAGCCCCAGTAGCTAG90.1630139467487774No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC90.1630139467487774No Hit
GGTATGAGCATATCTGAACTCCTGCTGTGGAATGTGTAGCAAGTGAATTA80.14490128599891325No Hit
CTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTC80.14490128599891325No Hit
GCTTAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGC70.1267886252490491No Hit
CCTTTAACCCCTAGGCTAAAGGGAAACCTTGACGATTACCTAGCTACTGG70.1267886252490491No Hit
CATTTATTGAGTACACTATAGATGCCAAGCATGGAATTACTTTACATACA70.1267886252490491No Hit
CCATTACACAAATCATTTGGCTGGGAATGGAACATTTACCATATGTATGA70.1267886252490491No Hit
CAATAATGGTCAACAGGAGATTGTACCCATGAAAAAGGAGCAGTCAGACA70.1267886252490491No Hit
GTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAAAT70.1267886252490491No Hit
CCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCTATGAACCATGTTTAA70.1267886252490491No Hit
CATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAAGGGGTTAGTT70.1267886252490491No Hit
TTTCAAACATGAATCCGTAGACCATTTCCTCCACCTAAGACATAATAACA60.10867596449918493No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT60.10867596449918493No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG60.10867596449918493No Hit
GTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAAATGTGCAATA60.10867596449918493No Hit
ACTTTACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAA60.10867596449918493No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT60.10867596449918493No Hit
TTATTGTTCTTTCTCCCCAAAGTAGTCTTTCCTGATGTCTGACTGCTCCT60.10867596449918493No Hit
CAATAATTGGTGTCCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCTAT60.10867596449918493No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)