FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H2_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_H2_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1419
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC50.3523608174770966No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA40.28188865398167723No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG30.21141649048625794No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT30.21141649048625794No Hit
GATCTCAGGGTCCTGGGATCGAGTCCCACATTGGGCTCCCTGCTCGGCCT30.21141649048625794No Hit
GCAGATACTTTCTCTGGGGCAGTCACCCAGTTGTTTCTTCCTTAAGTGCT30.21141649048625794No Hit
CCATGAATGATGTCCAAGTCAGTAGTTCAAAGCTTACAGTGAGCGGCATT30.21141649048625794No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA30.21141649048625794No Hit
GGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATG20.14094432699083861No Hit
GGCCTCTACCTTCGGCTCAGGTCATGATCTCAGGGCTGTCTCTTATACAC20.14094432699083861No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA20.14094432699083861No Hit
ACAAGGACCCTGATTCGGGGCTTGATCCCAGGACTTTGGAATCATGACCT20.14094432699083861No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG20.14094432699083861No Hit
GGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCAATAGCTGTCTC20.14094432699083861No Hit
CAACAATTTAGTTGTAGGGGCACCTGGGTGGCTCAGTTGGTTAAGCGACT20.14094432699083861No Hit
AAGCTACACCGTGCATGGAACCTGGACTATAATCTGGTTTCCAGTCTCTG20.14094432699083861No Hit
GCTTAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGC20.14094432699083861No Hit
GAGCAAAAGCAGGGCGAGCAGCAGAGACTCCCTGAACAGGGAGCCCAAAG20.14094432699083861No Hit
CAGTGGGAGACAGGAAACGGCAAAAACGGCAGTGGCTGAGACCTGACAGC20.14094432699083861No Hit
GTTCAATGGCTGAGCCAAGCCTTGAATGGCATGTCAGGTAGGCCAGGAAA20.14094432699083861No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCCT20.14094432699083861No Hit
CCACTGAGCAAGGAGCCTGATGCTGTACTTGATCCCAGAACCTAAGCCTA20.14094432699083861No Hit
GGTTAAAACCTCTGCCTTCGGCTCAGGTCATGATCTCAGGGCTGTCTCTT20.14094432699083861No Hit
GATTCACGAAGCCACGGGTATGCCTGCAGGGAAACAGAAGCTGCAGTATG20.14094432699083861No Hit
ATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA20.14094432699083861No Hit
CAGTTGTTAAGCGTCTGCCTTTGGATCACCTCATGATCTGTCTCTTATAC20.14094432699083861No Hit
GGCTACCTGCTGAGCAGGGAGCCCGATGTGGGGCTCCATCCCAGGACCCT20.14094432699083861No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT20.14094432699083861No Hit
CCTGACGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCCTGTC20.14094432699083861No Hit
GGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATATGAACTGCTAG20.14094432699083861No Hit
GCACAGGAGGTCCTTTAAACCTAATCCTCGCTGGGCAGTCGCCTTCACTT20.14094432699083861No Hit
ATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTGCTGAA20.14094432699083861No Hit
GTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGCTGTCTCT20.14094432699083861No Hit
GGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATT20.14094432699083861No Hit
AAGCAGGACAGTGGGAGACAGGAAACGGCAAAAACGGCAGTGGCTGAGAC20.14094432699083861No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTT20.14094432699083861No Hit
GTCCCAGCAAATGCTGAGGTAAGTCTTGATTGCCAATATTGCACATTTCA20.14094432699083861No Hit
TCCCTGGCCTTCCCCGCCTGGCGTGGTTGAACCAACCTCCCTTCCTTCCC20.14094432699083861No Hit
CTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGACTGTCTCTTATAC20.14094432699083861No Hit
ACACAGGACTCAATCCCAGGACCCTGGGATCATGACCTGAGGTGAAGGCA20.14094432699083861No Hit
GCCCCATGTGGGACTCGATCCCAGGACCCTGAGATCATGACCTGAGCCGA20.14094432699083861No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA20.14094432699083861No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC20.14094432699083861No Hit
GAGCCCAATGTGGGACTCGATCCCAGGACCCTGAGATCATGACCTGAGCT20.14094432699083861No Hit
CAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAG20.14094432699083861No Hit
AGGCTAGTGTCTTCACCCTGCTGCATTGTGACTAGCACCTGTCTCTTATA20.14094432699083861No Hit
GTCGTAAGGTCTCCACTGAGGCTCTCCCACGACACAGATCGAGGTGAACG20.14094432699083861No Hit
GCCTTCAACTCAGGTCATGATCCCTGGGATCAAGTCCTATGTCAGGCTCC20.14094432699083861No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA20.14094432699083861No Hit
TCTCGGGACCAATCTGCTATCTCCCGATGCAACTCAGATGCTGTCTCTTA20.14094432699083861No Hit
CAATTATACCTAACCACAGACTGGAATTTCCTTAATAAAATGCATTGCTG20.14094432699083861No Hit
GGGTTGAGCCCCACATCAGGCTCCCTGCTCGGTGGGAAGCCTGCTTTCCC20.14094432699083861No Hit
GAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGG20.14094432699083861No Hit
GAATCAGGCCCCGCATCAGGCTCCCTGCTCGGCTGGAAGCCTACCTCACC20.14094432699083861No Hit
GGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTCTTTGT20.14094432699083861No Hit
GTGCCTGATTAATGATCCCTGGGTTTTGCTTAATGCCTGTCTCTTATACA20.14094432699083861No Hit
AAGCAGGACAGCAGACAGTGTGAGACACACCAAATTCCTGTCTCTTATAC20.14094432699083861No Hit
TAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAA20.14094432699083861No Hit
GGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGA20.14094432699083861No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA20.14094432699083861No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGCTGTC20.14094432699083861No Hit
GCCTTCTGCTCCGGTCATGATCCCACCCAGGATCCTGGGATCAAGTCCCA20.14094432699083861No Hit
CCCTAAGAACATGCAGGAAAAGAGAGTGGCATCTTCAACAAATGAATAAT20.14094432699083861No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA20.14094432699083861No Hit
GGGTAGGAGCGGTGGCCACTTCCCTCAGAAACTGTCGATGCCTCTCAGAC20.14094432699083861No Hit
CTCCACAATGGGGTGGTCAGGATTGATCTCCAGGTGCTTCTTGGCCATCA20.14094432699083861No Hit
CCATGAATGATGTCCAAGTCAGTAGTTCAAAGCTTACAGTGAGCGGCCTG20.14094432699083861No Hit
GAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCA20.14094432699083861No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG20.14094432699083861No Hit
GTGCAGGACCATCTGTGGCCTTTATTTCCCTAATACTGGTCCATCTTCTC20.14094432699083861No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA20.14094432699083861No Hit
GACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGA20.14094432699083861No Hit
GGGGGAGTGGAGAGCCGAGCAGGGAGCCTAATGCCGGACTCGATCCCAGG20.14094432699083861No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC20.14094432699083861No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)