FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_G8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_G8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTCAGCCATATCACAGCTCCCATTCTAGGACAGTGTAAAGGGACAGCT25.405405405405405No Hit
ATCCCAGGATGCTGGGATCATGACCTGAGCCAAAGGCGGACACTTAACCG25.405405405405405No Hit
TTCTAGTACTGTGTCTACAGTGTCTGTTGAATTGTTCGCATGATAACCTA12.7027027027027026No Hit
CACACAAGGACCGCCAGCGGATTTTCCACACGGGCCCTAAGAACATGCAG12.7027027027027026No Hit
CATTACTATTCTTTCCTCCCTTATCTACTGAGGGGAGAAGAGCCAACGAA12.7027027027027026No Hit
GCCATATCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGG12.7027027027027026No Hit
ATAGTGAACACAAAAAATTTGAACTGTTTTATTGGCAAAAGAGAAAACAG12.7027027027027026No Hit
CAAAAACAAGCTCCACTAAAAGATGGGGAAGCAGAATTACAATTGAGCAA12.7027027027027026No Hit
GCTAGGATCAAGCCCCACCTTGGGCTCCACATTCAGCAGGGAGCCTGCTT12.7027027027027026No Hit
GAATTGTAGTCTAGCCCTTTTTTTCAAATGGGAATATAACGCTATACAAA12.7027027027027026No Hit
GTTTGTGAATGGGCCAAATTAATTGATAATGGTACAAATCAGCACAGAGT12.7027027027027026No Hit
GTACCATTATCAATTAATTTGGCCCATTCACAAACATAACTCTTAATTAG12.7027027027027026No Hit
AACTCATTGCTAGCATTAGAGTAAGCATCATAAAACACACATAGGAATCT12.7027027027027026No Hit
ATCCCAATAACAAGGGTTGGCTTTCAATAAGTCAAAATGTCTTGGATCAC12.7027027027027026No Hit
GTATAAACTACACACAGATCTCACTTATTTGTAGTTATATTCAAATTTAG12.7027027027027026No Hit
CACCCCCACTCTGCCCCCAGCCAGCCTACAGACTTCCAGGGGCTACCATC12.7027027027027026No Hit
GGTCAGAACCTTGGTGCACCCCCACGGTGAACTGCCTTCTGCCAACATTA12.7027027027027026No Hit
GATGTTTATTGCTATGCATTTCTCTCTTAGAAATGTTTTTTGCTATATTC12.7027027027027026No Hit
AAACAGAATTGAGCAAAGTTTCACGCAGTATATTGGGCTGTCTCTTATAC12.7027027027027026No Hit
GTCTTATTGAATATTTGCAATCAAACTCCGAGGGGAGAAGTACACCCACC12.7027027027027026No Hit
AAAACACACAATGACCGCCACCGTATTTTCCACACTGTCACTAATAACAT12.7027027027027026No Hit
AAATAACTCAAAAGTTTTCCACAGTGGTTGAATTGTGACTTACAAAGTCA12.7027027027027026No Hit
TAATAACACTCCATCAGTAGTTCTTTTGTCAAATGCATATGAGAAAAGGC12.7027027027027026No Hit
GCCTTCCGAGTACCTGGGACTCTTGACACATTTTGTTTTCCTACCCTGCA12.7027027027027026No Hit
CTTTTATAACATGCACTCTTTTTTATGATAGAGGCACTGAAACTAAAGAA12.7027027027027026No Hit
GTGCCATAGTGTGCACGGTACCCTCAGTGGCCCCAGGACTCCTGGGCCAG12.7027027027027026No Hit
TGGTAGGACTCATTCTACGTGCTATCTAGCATGGTACTACCTTGAGAAGG12.7027027027027026No Hit
TTTCTTAGCCAAGTCTTTCCAGTTTGGTTCTTCCATACAGTACCAAATGA12.7027027027027026No Hit
GATAAACGTGAATATATAGACACAAATAAAAACTATGGGTGCCTGAGTCT12.7027027027027026No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC12.7027027027027026No Hit
CTTCAGCTCAGGTCATGATCCCAGGGTCCTGGGATAGAGCCTGTCTCTTA12.7027027027027026No Hit
CCATGATCACCCTCCAGACTTTTCAACACTGATATCAAATGGTTTTCTTG12.7027027027027026No Hit
CTGCAGCTGCGTCACCCGGGAAAGAAAGTGCTTCAGAGCCCAAGCAAAGA12.7027027027027026No Hit
GAATCATAACGGTTGCATATTTCTACAGCTCTTCTTTAAGGAGAAGCTGA12.7027027027027026No Hit
GGAGCAAGGGATTGTGGAGGGATGGGTGAAGATGGTCAAAACGTACAAAC12.7027027027027026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)