FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_G7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_G7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAA25.263157894736842No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAGATGAGAAATC25.263157894736842No Hit
CTCTTCCAGGACATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTC25.263157894736842No Hit
GTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGCTGTCTCT12.631578947368421No Hit
CTTCGAGAACCTCTGAAAACTATTGAAAGAAATATTGTAAAAGAACTTTG12.631578947368421No Hit
GTCTTGATTGCCAATATTGCACATTTCAAACATGAATCCGTAGACCATTT12.631578947368421No Hit
AGTCAACAAAGAGCATTACCTCATCCCCAGCTTCAGTCAATAACCAACCC12.631578947368421No Hit
GTCCATGAGGGAAGAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTG12.631578947368421No Hit
ATACTGGGTTTCTTCGTAACTGCCCTCTGAATAGCTCACCTGTCTCTTAT12.631578947368421No Hit
CTATTCAACTGTCGCCAGTTCATTGGTACTGGTAGTCTCCCTGGGGGCAA12.631578947368421No Hit
TTCTCCAACTATTGCTCCCTCCTCAGTGAAAGCCCTTAGTAGTATCAAGG12.631578947368421No Hit
GGGGAAGTGTGAGACGGATAAGCAGGCTTCTCACTAACAGGGACCCGGAG12.631578947368421No Hit
TCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAACAGATCTTCATGA12.631578947368421No Hit
GCTATATCCTATGGCTTAGTTGGCTGTTTGTGACTGATTATCCTTAGGTT12.631578947368421No Hit
CAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCAT12.631578947368421No Hit
AAACAATGCCAAGGAAATTGGAAACGGCTGCTTTGAATTTTACCACAAAT12.631578947368421No Hit
CTATCAAGGAAGGCATTCAATCCATCGGCAAATAATTCTCGAGTCTTCAC12.631578947368421No Hit
AGTTAATTCACTTGCTACACATTCCACAGCAGGAGTTCAGATATGCTCAT12.631578947368421No Hit
GGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTCTGTCTCTTAT12.631578947368421No Hit
CTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACA12.631578947368421No Hit
CCAATGAGTTGGAATCCTTGATGAAAATGCCCTCATACCTGTCTCTAAAA12.631578947368421No Hit
CCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGA12.631578947368421No Hit
GTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATCATT12.631578947368421No Hit
CAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTG12.631578947368421No Hit
AAGCAGGGGACGTGGGAGAGGGAGAAGCAGGCTTCTCACGAACAGGGACC12.631578947368421No Hit
CCTAACCACAGACTGGAATTTCCTTAATACAATGAATTTTTGCTGAATCT12.631578947368421No Hit
GAAATAGTTCACTAGAAAAATTCAGTATTAAAAACATTTTCTCAAGTACT12.631578947368421No Hit
GCCTTACATACTGCTTGAAGTAGAACAAGAGATAAGCTGTCTCTTATACA12.631578947368421No Hit
TGATTATCGGGGAAGACTTTGTAATCCCCTGAATCCCTTTGTCAGTCATA12.631578947368421No Hit
AAAAAAAGGTTTCCATTAGAACATGCAAAGAATTCAATTGACAAGTCCAG12.631578947368421No Hit
GAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCT12.631578947368421No Hit
CTCCAGTGCTGATCCTGTTAAAAATAGGACTTGAAATGTCAGAGCAAGAC12.631578947368421No Hit
ATTCCACGATTTGTTTCCCAACAAGAGTGGCTGTTTCGATATCGAGGCCA12.631578947368421No Hit
GCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACT12.631578947368421No Hit
AAACAAGGCACAATAGAATAGATCAGAGGGCCCCAAAATACACTTATGCA12.631578947368421No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)