FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_F9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_F9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACATGTCTGTGTCACACACGTTGAGGCACACATTTATACCCGAAACAC12.5No Hit
CAATTACAGCAGACAAGAGAATAATGGACATGGCCCAGCATTAAGCATCA12.5No Hit
AAGTTCTTCAAATATTAAACGATGTATTCCAAACTAAATAAAATTTACAA12.5No Hit
TAAAAGGTACCAGGTAGAAAATACGCTAACCTACAATCACTCTCACACCA12.5No Hit
ACTTCAAGCAGTATTTGTAACGCAAGAATAAATTTTATTTGTTAGAAACT12.5No Hit
GTTCAATGATGCTTAAAGAATTTCCAAGACCATTATACTCTTGTATGCTA12.5No Hit
CGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAAT12.5No Hit
ATATCTGATATGATAAAGATTACTCAGAAATAAGCCTTAAGTAATAGCAT12.5No Hit
ATCCTCAAGCAGGGAGCCTGGTGCGAGGCTGGATCCCACGACCCTGAGAT12.5No Hit
AACAATTAAACATAACCATTTTACAAAACAAATAAACAACTATATATAAT12.5No Hit
AAATAAACTTGCTTCTCAGTCATTTCACTGGATATTTAAATCAGTTGATT12.5No Hit
ATTACCTTCTCTACCATTAAAAAATTATTACGAAGTCAAAAATGCAGTTG12.5No Hit
GTGGAAAAGTACCTATTAATTAAATACACTGTTTTAAAATCCATCATACT12.5No Hit
ATAAAATACAACAAAAATAACAAACATTTGAAAAGATCAACAATTTCACA12.5No Hit
TAGTAAGGGCTTTCTAGCTGACAGCGAGGATGAAGTGCTATTTGTGATGG12.5No Hit
GCAGGGAGAGCGGGAGATGGAGAAGTAGGCTTCCCGCTGAGCAGGGAGCC12.5No Hit
AAAGGATACCATCAACTAATTAATAGAGTTATCTTTTATATAATAATAGT12.5No Hit
CTGAAAGGTGGTGCAAGGGACCTGGGGTTACCGACGTCCCCCAAGGCAGG12.5No Hit
AATCTAGAATGCAGATTACATATAAAAATTGCTATATAATCCAAACAACA12.5No Hit
GAGTAAGGGGAAGAGTTTCAACTCTCTTCTGTGTCTTCTGGGAAATGGAT12.5No Hit
TACAAATACCTTTGCATTTTTTTAAATATGCAATATTACCTTATCAAAAA12.5No Hit
CGTGTGCAGTGGGTATGCTGAGCGCTCTGGGCCGCCTTCCTGGGTCAGCG12.5No Hit
TTCCAGATGAAAAGACTATGGCCTAGAGAATTTAAGTACCATCCCAGCCA12.5No Hit
GCATGTTATGTCCCGGACGTAGTAAGTGCGTGGCGGATTGTTTATTACTG12.5No Hit
GGCTTATTATACAGCGTGGAAAACTAAAACCATGACCTTAAGGAACTTAT12.5No Hit
ACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACC12.5No Hit
GTATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGTGT12.5No Hit
GTATGTTAATTACACTGGAATTAAAAACAAAGATATGCATCTTGGAGACA12.5No Hit
TGTGAGGACATTGTGATATGGTGCACAAAACCAACACCAAAGCTTGGCTC12.5No Hit
AATAAAAGATAACAGAAGCTCAAAAAAGAACTAAAGAGACTTGGTGAAAA12.5No Hit
CTGTACAAAAATCACAGACTCAAAAAGAACACCTCACGCACCCAACACAA12.5No Hit
GACATGTGTTAGCACGTAAATGATGCCTTTGAGATGCTACGGTCAGTAGT12.5No Hit
AAAAACTAATCATAAAAAAGCCACTCTCACAATCCATCACAAACACTTAA12.5No Hit
GTCTTCTCTTGAGTTAATGGCCAGTCTGGCGCTCCATCCCCTTCTCTTAC12.5No Hit
GTGTATGTTTAATGATCCCCATTTTCTGTCTGAAGGATGATCTGTTGGAG12.5No Hit
CCTGGGTGGCTCAGTCGGTTAAGCTGCTGCCTTTGGCTCAGGTCATGGTC12.5No Hit
AAACACAACAAACACAAAAACAAAAAACAAACAAGAAAAAATAAAGGTAC12.5No Hit
GCCAGACCCGTACAAGAGCAAAGGAGCAGCCATTATGTCAAGGACTCAGA12.5No Hit
AATAAATAGATCAAAACATCTTTACAAAAGACTTAGCCGAACTGCTAACA12.5No Hit
CTCAAGTGCAATTCACAAATATTAAATAAATTAAAAATTTCACTAAAAAA12.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)