FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_F8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_F8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCTAACCTGAGCAGAAGCCAGAGGCTTAACCCATTGACCGACCCTGA27.4074074074074066No Hit
GTCTTTGAGGAAGCGCCCTTCAGTGGTAACCAGCTGAGAGTTCATCAGGC27.4074074074074066No Hit
AAGCCTTTGAGTTTAATTTCACATGACTGAATTCTAAAGCACTTTCATGA13.7037037037037033No Hit
GATAAATACAGCATTGAATTAAAGCAAATTTTATAAAAACTTTCATAAAG13.7037037037037033No Hit
GGTTTAGTAAGAAAGGATTGGGAGAGAGAGATGGTAAGGAAAGAGAAAAA13.7037037037037033No Hit
ACAAGGGACAAGGGGTTACCGACGACCGCGAAGTCAGGTACATGTGGACC13.7037037037037033No Hit
ATGTAGGTAAATCTACAGTCTATCTTGGGCTAGAGATAGAATCATGAAAG13.7037037037037033No Hit
TAGGAATTGTTCCAGGATAGGACATGCACAGCTGACACAATCTTTCTTAA13.7037037037037033No Hit
GTATTTTCTTAATTAAGCTTCTCTGACCCAGGGAATTTTAATAAGCAGTC13.7037037037037033No Hit
CAGGCAGAGGGGGAAGCAGGCTTCCGCTGAGCAGGGAGCCGGATGCGGGG13.7037037037037033No Hit
TCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTTCTTTTATTCTC13.7037037037037033No Hit
TTACATAAGCATCTGCCTTCAGCTCATGTCATGATACCAGGGTCATTGGA13.7037037037037033No Hit
GGCTGGGAACGAGGTGAGGGGAGTCACCCGAGCTGCTACGGCGAGAAGCT13.7037037037037033No Hit
GGCTACTTGCTCAGCGGCGAGCCTGCTGATCCCTCTGCCTCTGACTGTCA13.7037037037037033No Hit
AAATTTCAATAAATACATGATCTTAAGTCATAAAAATAATAAAATTCAAT13.7037037037037033No Hit
GCTCAGCAGGGAGCCTGCTTCTCCCTCTACCTCTACCTGTCTCTTATACA13.7037037037037033No Hit
TAAGAACCCCGCGGTAACCCATAGTTGTTCAGAGTGTGTGGCGCTAGGAT13.7037037037037033No Hit
GAATACTGGAGAATTGCACCTTTCGACCTTTTCGAAATAAGTTTTATATA13.7037037037037033No Hit
CCTCCAAACACTGAAAATAAGAGTACATGAAGGGTATGAAGAATTCACAA13.7037037037037033No Hit
AAAAAAAGAGTGAAATTTATAAAATAACAAAAAGGACCAAAAGAATAATT13.7037037037037033No Hit
GTTCAATACAGTCAAGAGTGCAATCTATAAGACAAGGAAGACACCAGATG13.7037037037037033No Hit
GCCCAGGTCATGATCCCAGCGTCCTGGGATTGAGCCCCCTATCGGGCTCC13.7037037037037033No Hit
GTACTATCGGTGATTTTTCTCACGTTCTTTAGTATTGAACCAACGCATGT13.7037037037037033No Hit
GCAAAAGCAGGGGATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTAAC13.7037037037037033No Hit
CCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)