FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E9_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P3_E9_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCAGAAAGGTAGCGCGAAGTAGGTACAGATGCAATTGTCATTCTAAGTG12.0408163265306123No Hit
CAACGACACACAGTCGCATAAAGTACAAAATTAAAATCAGGTACTCAATA12.0408163265306123No Hit
AAGTAAGGGAGATGATGATTATCTAACCGTCAAAAGTCCCCTAATCACTG12.0408163265306123No Hit
CTAATATGATTTGTCAATTTGAAATCTATGTTGTTTAAATCTTCGTTCCA12.0408163265306123No Hit
CTCATAATAACAAAACATAACTCTCTTAAAATCAAATAAAATTTCCGATC12.0408163265306123No Hit
CCACATTCCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACA12.0408163265306123No Hit
CCATATACAAAATAAACATAAAACAACAAAACACACAAAAGAGACAATGG12.0408163265306123No Hit
GACTAACAGCCAGAGGTAGAAGCAATATTTATGCTCCATACTCTTAAAAA12.0408163265306123No Hit
CATACAGTCTATAAATACCAACCTGTATACAATACATTGAAAAAATAGAA12.0408163265306123No Hit
GTTGTAAGGCTAGCATAAATGTTTGTTGTTCGAAAAAATTCTCTCTCGCT12.0408163265306123No Hit
CACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC12.0408163265306123No Hit
GTGAAGAGTCTGCCTTCATCTCACGTCATGACCACGCTACCTCGGATCTA12.0408163265306123No Hit
AACCTGATGTCAAGCAATATAAACAATAATCCACCACCCAACACATCGTA12.0408163265306123No Hit
CCTTTGGCCCTGCCTCTCCCCAATTCCCATATCACTCTCTCCCCCCAGGA12.0408163265306123No Hit
TCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTCTGTCTCTTATACA12.0408163265306123No Hit
ATCAAAAGTAGAACAAAAAAACACGAAATATCCACAATAACAAAACTAAC12.0408163265306123No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCA12.0408163265306123No Hit
ACATTAGATCTCTCAGTTCTTTTATTCTCTCCATATTGACTGTCTCTTAT12.0408163265306123No Hit
CTTTTAAAAAATATCACAACCAGAGCACCTGGGTGGCTAAGCTGGTTTCA12.0408163265306123No Hit
ATACATATTTAAACAAAAAAACAAAAAAGGAACAAATCCACATAAAAAAA12.0408163265306123No Hit
CAAGTAAACTATTACATTAATAATATCAAAAAGACAAATCAAGACAAATT12.0408163265306123No Hit
AAATAAAAATTCATACATGAAGATAAAGGAATCAATATTTACAAACTCTG12.0408163265306123No Hit
CAGTGATACTACCAGTACCAATCAAATGCCTACAGTTTAATAGATCGCCA12.0408163265306123No Hit
GTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGA12.0408163265306123No Hit
GTATTTAGGTGTTGGACCATTTTTCTCTCCACAGTTTTTAAAGAAAAATA12.0408163265306123No Hit
GATAAGAATAAAAAAAAAACTGCCATACAACTTGTGTGGAAGGTCTACAA12.0408163265306123No Hit
AACAGAAACTGATATCAGAAAGCAAGACTACCACAACAAAACAAAAGCAG12.0408163265306123No Hit
ATATGAATGGTTCCCTTATGACAAACACATCCCCCTTGGAACCGATTCTT12.0408163265306123No Hit
AATAAAAAGAATGAGGAAGTCGGTGTCAGAGCGTTGTCTGTCTCTTATAC12.0408163265306123No Hit
TAAATGAACCCAATGAATAAACTTAACAGAATGATAAACCCCTCTATCTT12.0408163265306123No Hit
GCTCAGTTCATATATCCTAAAAGCAGGCCAATATCACCTGTCTCATATAC12.0408163265306123No Hit
GCAACATTGTGAATCCTTTTAATGTTCAATGGCTGTAATTAGGAAATCCA12.0408163265306123No Hit
CCTCATAAGTATGTCCTTGAAGAGAAGGTACACCTGAAATTTATCCAAAT12.0408163265306123No Hit
GACCACCAACTCCGCAACAAAAAGAAAAACTGTGCCTGTTCATCTTAATG12.0408163265306123No Hit
CTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTCTG12.0408163265306123No Hit
TCACAGAAAGGTACATCGAACAAGGTACATATGAAAATGACATTATAAGA12.0408163265306123No Hit
GTATAGTGGTTCCTCAAAAAAAATCAAACATGGAATTACTGAGTGATCCA12.0408163265306123No Hit
GGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG12.0408163265306123No Hit
AACCACAAAATTCTGAATAAGTGTATCAACACTTGCCTTCCACAAAAAGT12.0408163265306123No Hit
GATTATAGTGGGGTTGGGGGTGGTGGGGTTTTGGCTGGGTGTGGGGTGAG12.0408163265306123No Hit
GTTTGGAGCGAATTCCAGTGGGACCGGGAGGACTGGCGGCCCGGCGGGCG12.0408163265306123No Hit
CTCAACATATATGCTGGGAGCATGGAGGAACTAGAGGGAAAAGTGAATGC12.0408163265306123No Hit
CTGGGCAGATCTAAGAAATATACCTAAGAGGAAAAAGCACATTCTTTCAT12.0408163265306123No Hit
TAATGAAAACAATGATTGCAAACACAGACACCTTTATATAAAAAAAATCT12.0408163265306123No Hit
ATATAATACACCAGATCCAAAATAAAGCAATGTAAAAGCCAAAGTATACA12.0408163265306123No Hit
AAACACCAACTATTGTTTGTAAACAAATCGTTGAATCTATCTTTAAAAAG12.0408163265306123No Hit
AGCCCACTACCAGTGTGCCAAACAACACCAATAGAATCACAAAATGCAAT12.0408163265306123No Hit
GTGTTAGGGGATGGGAAGAATCCTGAATGTCAGTTCTGACCATCTTCCAG12.0408163265306123No Hit
TAACACTATTGGACTCAGTCTGCCTGACAGTAAGAATGCTATAGTCCCGT12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)